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Fueling Clinical and Translational Research in Appalachia: Informatics Platform Approach

BACKGROUND: The Appalachian population is distinct, not just culturally and geographically but also in its health care needs, facing the most health care disparities in the United States. To meet these unique demands, Appalachian medical centers need an arsenal of analytics and data science tools wi...

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Autores principales: Cecchetti, Alfred A, Bhardwaj, Niharika, Murughiyan, Usha, Kothakapu, Gouthami, Sundaram, Uma
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7593861/
https://www.ncbi.nlm.nih.gov/pubmed/33052114
http://dx.doi.org/10.2196/17962
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author Cecchetti, Alfred A
Bhardwaj, Niharika
Murughiyan, Usha
Kothakapu, Gouthami
Sundaram, Uma
author_facet Cecchetti, Alfred A
Bhardwaj, Niharika
Murughiyan, Usha
Kothakapu, Gouthami
Sundaram, Uma
author_sort Cecchetti, Alfred A
collection PubMed
description BACKGROUND: The Appalachian population is distinct, not just culturally and geographically but also in its health care needs, facing the most health care disparities in the United States. To meet these unique demands, Appalachian medical centers need an arsenal of analytics and data science tools with the foundation of a centralized data warehouse to transform health care data into actionable clinical interventions. However, this is an especially challenging task given the fragmented state of medical data within Appalachia and the need for integration of other types of data such as environmental, social, and economic with medical data. OBJECTIVE: This paper aims to present the structure and process of the development of an integrated platform at a midlevel Appalachian academic medical center along with its initial uses. METHODS: The Appalachian Informatics Platform was developed by the Appalachian Clinical and Translational Science Institute’s Division of Clinical Informatics and consists of 4 major components: a centralized clinical data warehouse, modeling (statistical and machine learning), visualization, and model evaluation. Data from different clinical systems, billing systems, and state- or national-level data sets were integrated into a centralized data warehouse. The platform supports research efforts by enabling curation and analysis of data using the different components, as appropriate. RESULTS: The Appalachian Informatics Platform is functional and has supported several research efforts since its implementation for a variety of purposes, such as increasing knowledge of the pathophysiology of diseases, risk identification, risk prediction, and health care resource utilization research and estimation of the economic impact of diseases. CONCLUSIONS: The platform provides an inexpensive yet seamless way to translate clinical and translational research ideas into clinical applications for regions similar to Appalachia that have limited resources and a largely rural population.
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spelling pubmed-75938612020-10-30 Fueling Clinical and Translational Research in Appalachia: Informatics Platform Approach Cecchetti, Alfred A Bhardwaj, Niharika Murughiyan, Usha Kothakapu, Gouthami Sundaram, Uma JMIR Med Inform Original Paper BACKGROUND: The Appalachian population is distinct, not just culturally and geographically but also in its health care needs, facing the most health care disparities in the United States. To meet these unique demands, Appalachian medical centers need an arsenal of analytics and data science tools with the foundation of a centralized data warehouse to transform health care data into actionable clinical interventions. However, this is an especially challenging task given the fragmented state of medical data within Appalachia and the need for integration of other types of data such as environmental, social, and economic with medical data. OBJECTIVE: This paper aims to present the structure and process of the development of an integrated platform at a midlevel Appalachian academic medical center along with its initial uses. METHODS: The Appalachian Informatics Platform was developed by the Appalachian Clinical and Translational Science Institute’s Division of Clinical Informatics and consists of 4 major components: a centralized clinical data warehouse, modeling (statistical and machine learning), visualization, and model evaluation. Data from different clinical systems, billing systems, and state- or national-level data sets were integrated into a centralized data warehouse. The platform supports research efforts by enabling curation and analysis of data using the different components, as appropriate. RESULTS: The Appalachian Informatics Platform is functional and has supported several research efforts since its implementation for a variety of purposes, such as increasing knowledge of the pathophysiology of diseases, risk identification, risk prediction, and health care resource utilization research and estimation of the economic impact of diseases. CONCLUSIONS: The platform provides an inexpensive yet seamless way to translate clinical and translational research ideas into clinical applications for regions similar to Appalachia that have limited resources and a largely rural population. JMIR Publications 2020-10-14 /pmc/articles/PMC7593861/ /pubmed/33052114 http://dx.doi.org/10.2196/17962 Text en ©Alfred A Cecchetti, Niharika Bhardwaj, Usha Murughiyan, Gouthami Kothakapu, Uma Sundaram. Originally published in JMIR Medical Informatics (http://medinform.jmir.org), 14.10.2020. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on http://medinform.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Cecchetti, Alfred A
Bhardwaj, Niharika
Murughiyan, Usha
Kothakapu, Gouthami
Sundaram, Uma
Fueling Clinical and Translational Research in Appalachia: Informatics Platform Approach
title Fueling Clinical and Translational Research in Appalachia: Informatics Platform Approach
title_full Fueling Clinical and Translational Research in Appalachia: Informatics Platform Approach
title_fullStr Fueling Clinical and Translational Research in Appalachia: Informatics Platform Approach
title_full_unstemmed Fueling Clinical and Translational Research in Appalachia: Informatics Platform Approach
title_short Fueling Clinical and Translational Research in Appalachia: Informatics Platform Approach
title_sort fueling clinical and translational research in appalachia: informatics platform approach
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7593861/
https://www.ncbi.nlm.nih.gov/pubmed/33052114
http://dx.doi.org/10.2196/17962
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