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MRI-based radiomics to predict lipomatous soft tissue tumors malignancy: a pilot study

OBJECTIVES: To develop and validate a MRI-based radiomic method to predict malignancies in lipomatous soft tissue tumors. METHODS: This retrospective study searched in the database of our pathology department, data from patients with lipomatous soft tissue tumors, with histology and gadolinium-contr...

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Autores principales: Leporq, Benjamin, Bouhamama, Amine, Pilleul, Frank, Lame, Fabrice, Bihane, Catherine, Sdika, Michael, Blay, Jean-Yves, Beuf, Olivier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7594281/
https://www.ncbi.nlm.nih.gov/pubmed/33115533
http://dx.doi.org/10.1186/s40644-020-00354-7
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author Leporq, Benjamin
Bouhamama, Amine
Pilleul, Frank
Lame, Fabrice
Bihane, Catherine
Sdika, Michael
Blay, Jean-Yves
Beuf, Olivier
author_facet Leporq, Benjamin
Bouhamama, Amine
Pilleul, Frank
Lame, Fabrice
Bihane, Catherine
Sdika, Michael
Blay, Jean-Yves
Beuf, Olivier
author_sort Leporq, Benjamin
collection PubMed
description OBJECTIVES: To develop and validate a MRI-based radiomic method to predict malignancies in lipomatous soft tissue tumors. METHODS: This retrospective study searched in the database of our pathology department, data from patients with lipomatous soft tissue tumors, with histology and gadolinium-contrast enhanced T(1)w MR images, obtained from 56 centers with non-uniform protocols. For each tumor, 87 radiomic features were extracted by two independent observers to evaluate the inter-observer reproducibility. A reduction of learning base dimension was performed from reproducibility and relevancy criteria. A model was subsequently prototyped using a linear support vector machine to predict malignant lesions. RESULTS: Eighty-one subjects with lipomatous soft tissue tumors including 40 lipomas and 41 atypical lipomatous tumors or well-differentiated liposarcomas with fat-suppressed T(1)w contrast enhanced MR images available were retrospectively enrolled. Based on a Pearson’s correlation coefficient threshold at 0.8, 55 out of 87 (63.2%) radiomic features were considered reproducible. Further introduction of relevancy finally selected 35 radiomic features to be integrated in the model. To predict malignant tumors, model diagnostic performances were as follow: AUROC = 0.96; sensitivity = 100%; specificity = 90%; positive predictive value = 90.9%; negative predictive value = 100% and overall accuracy = 95.0%. CONCLUSION: This work demonstrates that radiomics allows to predict malignancy in soft tissue lipomatous tumors with routinely used MR acquisition in clinical oncology. These encouraging results need to be further confirmed in an external validation population.
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spelling pubmed-75942812020-10-30 MRI-based radiomics to predict lipomatous soft tissue tumors malignancy: a pilot study Leporq, Benjamin Bouhamama, Amine Pilleul, Frank Lame, Fabrice Bihane, Catherine Sdika, Michael Blay, Jean-Yves Beuf, Olivier Cancer Imaging Research Article OBJECTIVES: To develop and validate a MRI-based radiomic method to predict malignancies in lipomatous soft tissue tumors. METHODS: This retrospective study searched in the database of our pathology department, data from patients with lipomatous soft tissue tumors, with histology and gadolinium-contrast enhanced T(1)w MR images, obtained from 56 centers with non-uniform protocols. For each tumor, 87 radiomic features were extracted by two independent observers to evaluate the inter-observer reproducibility. A reduction of learning base dimension was performed from reproducibility and relevancy criteria. A model was subsequently prototyped using a linear support vector machine to predict malignant lesions. RESULTS: Eighty-one subjects with lipomatous soft tissue tumors including 40 lipomas and 41 atypical lipomatous tumors or well-differentiated liposarcomas with fat-suppressed T(1)w contrast enhanced MR images available were retrospectively enrolled. Based on a Pearson’s correlation coefficient threshold at 0.8, 55 out of 87 (63.2%) radiomic features were considered reproducible. Further introduction of relevancy finally selected 35 radiomic features to be integrated in the model. To predict malignant tumors, model diagnostic performances were as follow: AUROC = 0.96; sensitivity = 100%; specificity = 90%; positive predictive value = 90.9%; negative predictive value = 100% and overall accuracy = 95.0%. CONCLUSION: This work demonstrates that radiomics allows to predict malignancy in soft tissue lipomatous tumors with routinely used MR acquisition in clinical oncology. These encouraging results need to be further confirmed in an external validation population. BioMed Central 2020-10-28 /pmc/articles/PMC7594281/ /pubmed/33115533 http://dx.doi.org/10.1186/s40644-020-00354-7 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Leporq, Benjamin
Bouhamama, Amine
Pilleul, Frank
Lame, Fabrice
Bihane, Catherine
Sdika, Michael
Blay, Jean-Yves
Beuf, Olivier
MRI-based radiomics to predict lipomatous soft tissue tumors malignancy: a pilot study
title MRI-based radiomics to predict lipomatous soft tissue tumors malignancy: a pilot study
title_full MRI-based radiomics to predict lipomatous soft tissue tumors malignancy: a pilot study
title_fullStr MRI-based radiomics to predict lipomatous soft tissue tumors malignancy: a pilot study
title_full_unstemmed MRI-based radiomics to predict lipomatous soft tissue tumors malignancy: a pilot study
title_short MRI-based radiomics to predict lipomatous soft tissue tumors malignancy: a pilot study
title_sort mri-based radiomics to predict lipomatous soft tissue tumors malignancy: a pilot study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7594281/
https://www.ncbi.nlm.nih.gov/pubmed/33115533
http://dx.doi.org/10.1186/s40644-020-00354-7
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