Cargando…

Biomarker discovery in attention deficit hyperactivity disorder: RNA sequencing of whole blood in discordant twin and case-controlled cohorts

BACKGROUND: A variety of DNA-based methods have been applied to identify genetic markers of attention deficit hyperactivity disorder (ADHD), but the connection to RNA-based gene expression has not been fully exploited. METHODS: Using well defined cohorts of discordant, monozygotic twins from the Mic...

Descripción completa

Detalles Bibliográficos
Autores principales: McCaffrey, Timothy A., St. Laurent, Georges, Shtokalo, Dmitry, Antonets, Denis, Vyatkin, Yuri, Jones, Daniel, Battison, Eleanor, Nigg, Joel T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7594430/
https://www.ncbi.nlm.nih.gov/pubmed/33115496
http://dx.doi.org/10.1186/s12920-020-00808-8
_version_ 1783601634138390528
author McCaffrey, Timothy A.
St. Laurent, Georges
Shtokalo, Dmitry
Antonets, Denis
Vyatkin, Yuri
Jones, Daniel
Battison, Eleanor
Nigg, Joel T.
author_facet McCaffrey, Timothy A.
St. Laurent, Georges
Shtokalo, Dmitry
Antonets, Denis
Vyatkin, Yuri
Jones, Daniel
Battison, Eleanor
Nigg, Joel T.
author_sort McCaffrey, Timothy A.
collection PubMed
description BACKGROUND: A variety of DNA-based methods have been applied to identify genetic markers of attention deficit hyperactivity disorder (ADHD), but the connection to RNA-based gene expression has not been fully exploited. METHODS: Using well defined cohorts of discordant, monozygotic twins from the Michigan State University Twin Registry, and case-controlled ADHD cases in adolescents, the present studies utilized advanced single molecule RNA sequencing to identify expressed changes in whole blood RNA in ADHD. Multiple analytical strategies were employed to narrow differentially expressed RNA targets to a small set of potential biomarkers of ADHD. RESULTS: RNA markers common to both the discordant twin study and case-controlled subjects further narrowed the putative targets, some of which had been previously associated with ADHD at the DNA level. The potential role of several differentially expressed genes, including ABCB5, RGS2, GAK, GIT1 and 3 members of the galactose metabolism pathway (GALE, GALT, GALK1) are substantiated by prior associations to ADHD and by established mechanistic connections to molecular pathways relevant to ADHD and behavioral control. CONCLUSIONS: The convergence of DNA, RNA, and metabolic data suggests these may be promising targets for diagnostics and therapeutics in ADHD.
format Online
Article
Text
id pubmed-7594430
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-75944302020-10-30 Biomarker discovery in attention deficit hyperactivity disorder: RNA sequencing of whole blood in discordant twin and case-controlled cohorts McCaffrey, Timothy A. St. Laurent, Georges Shtokalo, Dmitry Antonets, Denis Vyatkin, Yuri Jones, Daniel Battison, Eleanor Nigg, Joel T. BMC Med Genomics Research Article BACKGROUND: A variety of DNA-based methods have been applied to identify genetic markers of attention deficit hyperactivity disorder (ADHD), but the connection to RNA-based gene expression has not been fully exploited. METHODS: Using well defined cohorts of discordant, monozygotic twins from the Michigan State University Twin Registry, and case-controlled ADHD cases in adolescents, the present studies utilized advanced single molecule RNA sequencing to identify expressed changes in whole blood RNA in ADHD. Multiple analytical strategies were employed to narrow differentially expressed RNA targets to a small set of potential biomarkers of ADHD. RESULTS: RNA markers common to both the discordant twin study and case-controlled subjects further narrowed the putative targets, some of which had been previously associated with ADHD at the DNA level. The potential role of several differentially expressed genes, including ABCB5, RGS2, GAK, GIT1 and 3 members of the galactose metabolism pathway (GALE, GALT, GALK1) are substantiated by prior associations to ADHD and by established mechanistic connections to molecular pathways relevant to ADHD and behavioral control. CONCLUSIONS: The convergence of DNA, RNA, and metabolic data suggests these may be promising targets for diagnostics and therapeutics in ADHD. BioMed Central 2020-10-28 /pmc/articles/PMC7594430/ /pubmed/33115496 http://dx.doi.org/10.1186/s12920-020-00808-8 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
McCaffrey, Timothy A.
St. Laurent, Georges
Shtokalo, Dmitry
Antonets, Denis
Vyatkin, Yuri
Jones, Daniel
Battison, Eleanor
Nigg, Joel T.
Biomarker discovery in attention deficit hyperactivity disorder: RNA sequencing of whole blood in discordant twin and case-controlled cohorts
title Biomarker discovery in attention deficit hyperactivity disorder: RNA sequencing of whole blood in discordant twin and case-controlled cohorts
title_full Biomarker discovery in attention deficit hyperactivity disorder: RNA sequencing of whole blood in discordant twin and case-controlled cohorts
title_fullStr Biomarker discovery in attention deficit hyperactivity disorder: RNA sequencing of whole blood in discordant twin and case-controlled cohorts
title_full_unstemmed Biomarker discovery in attention deficit hyperactivity disorder: RNA sequencing of whole blood in discordant twin and case-controlled cohorts
title_short Biomarker discovery in attention deficit hyperactivity disorder: RNA sequencing of whole blood in discordant twin and case-controlled cohorts
title_sort biomarker discovery in attention deficit hyperactivity disorder: rna sequencing of whole blood in discordant twin and case-controlled cohorts
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7594430/
https://www.ncbi.nlm.nih.gov/pubmed/33115496
http://dx.doi.org/10.1186/s12920-020-00808-8
work_keys_str_mv AT mccaffreytimothya biomarkerdiscoveryinattentiondeficithyperactivitydisorderrnasequencingofwholebloodindiscordanttwinandcasecontrolledcohorts
AT stlaurentgeorges biomarkerdiscoveryinattentiondeficithyperactivitydisorderrnasequencingofwholebloodindiscordanttwinandcasecontrolledcohorts
AT shtokalodmitry biomarkerdiscoveryinattentiondeficithyperactivitydisorderrnasequencingofwholebloodindiscordanttwinandcasecontrolledcohorts
AT antonetsdenis biomarkerdiscoveryinattentiondeficithyperactivitydisorderrnasequencingofwholebloodindiscordanttwinandcasecontrolledcohorts
AT vyatkinyuri biomarkerdiscoveryinattentiondeficithyperactivitydisorderrnasequencingofwholebloodindiscordanttwinandcasecontrolledcohorts
AT jonesdaniel biomarkerdiscoveryinattentiondeficithyperactivitydisorderrnasequencingofwholebloodindiscordanttwinandcasecontrolledcohorts
AT battisoneleanor biomarkerdiscoveryinattentiondeficithyperactivitydisorderrnasequencingofwholebloodindiscordanttwinandcasecontrolledcohorts
AT niggjoelt biomarkerdiscoveryinattentiondeficithyperactivitydisorderrnasequencingofwholebloodindiscordanttwinandcasecontrolledcohorts