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Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests

BACKGROUND: The use of matrix‐assisted laser desorption/ionization time‐of‐flight mass spectrometry is gradually spreading among large‐scale laboratories; however, this method is impractical for small‐scale laboratories. In laboratories without access to these rapid identification methods, problems...

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Autores principales: Ohtaki, Hirofumi, Takahashi, Akifumi, Niwa, Ayumi, Yonetamari, Jun, Nakayama, Asami, Kuchibiro, Tomokazu, Ohta, Hirotoshi, Ito, Hiroyasu, Baba, Hisashi, Murakami, Nobuo, Ohkusu, Kiyofumi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7595914/
https://www.ncbi.nlm.nih.gov/pubmed/32594571
http://dx.doi.org/10.1002/jcla.23453
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author Ohtaki, Hirofumi
Takahashi, Akifumi
Niwa, Ayumi
Yonetamari, Jun
Nakayama, Asami
Kuchibiro, Tomokazu
Ohta, Hirotoshi
Ito, Hiroyasu
Baba, Hisashi
Murakami, Nobuo
Ohkusu, Kiyofumi
author_facet Ohtaki, Hirofumi
Takahashi, Akifumi
Niwa, Ayumi
Yonetamari, Jun
Nakayama, Asami
Kuchibiro, Tomokazu
Ohta, Hirotoshi
Ito, Hiroyasu
Baba, Hisashi
Murakami, Nobuo
Ohkusu, Kiyofumi
author_sort Ohtaki, Hirofumi
collection PubMed
description BACKGROUND: The use of matrix‐assisted laser desorption/ionization time‐of‐flight mass spectrometry is gradually spreading among large‐scale laboratories; however, this method is impractical for small‐scale laboratories. In laboratories without access to these rapid identification methods, problems related to them remain unsolved. In this study, we aimed to develop a rapid and inexpensive method to presumptively identify Enterobacterales using CHROMagar Orientation medium. METHODS: The algorithm for presumptive identification of Enterobacteriaceae using CHROMagar Orientation medium was based on our previous studies. Modified property tests for indole, lysine decarboxylase, ornithine decarboxylase, and hydrogen sulfide were performed to evaluate the differentiation of the bacterial species. RESULTS: Using the type strains and clinical isolates, it was possible to conduct the property tests at a low cost, within 4 hours. The spot indole test was performed without any nonspecific reactions for the bacteria forming colored colonies. The presumptive identification of bacteria was thereby possible within 24 hours after specimen submission. CONCLUSION: All these results suggest that the rapid presumptive identification of Enterobacterales is possible with this new identification method using CHROMagar Orientation medium. This is therefore a prompt and economical method that can be used in routine laboratory work.
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spelling pubmed-75959142020-11-02 Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests Ohtaki, Hirofumi Takahashi, Akifumi Niwa, Ayumi Yonetamari, Jun Nakayama, Asami Kuchibiro, Tomokazu Ohta, Hirotoshi Ito, Hiroyasu Baba, Hisashi Murakami, Nobuo Ohkusu, Kiyofumi J Clin Lab Anal Brief Report BACKGROUND: The use of matrix‐assisted laser desorption/ionization time‐of‐flight mass spectrometry is gradually spreading among large‐scale laboratories; however, this method is impractical for small‐scale laboratories. In laboratories without access to these rapid identification methods, problems related to them remain unsolved. In this study, we aimed to develop a rapid and inexpensive method to presumptively identify Enterobacterales using CHROMagar Orientation medium. METHODS: The algorithm for presumptive identification of Enterobacteriaceae using CHROMagar Orientation medium was based on our previous studies. Modified property tests for indole, lysine decarboxylase, ornithine decarboxylase, and hydrogen sulfide were performed to evaluate the differentiation of the bacterial species. RESULTS: Using the type strains and clinical isolates, it was possible to conduct the property tests at a low cost, within 4 hours. The spot indole test was performed without any nonspecific reactions for the bacteria forming colored colonies. The presumptive identification of bacteria was thereby possible within 24 hours after specimen submission. CONCLUSION: All these results suggest that the rapid presumptive identification of Enterobacterales is possible with this new identification method using CHROMagar Orientation medium. This is therefore a prompt and economical method that can be used in routine laboratory work. John Wiley and Sons Inc. 2020-06-28 /pmc/articles/PMC7595914/ /pubmed/32594571 http://dx.doi.org/10.1002/jcla.23453 Text en © 2020 The Authors. Journal of Clinical Laboratory Analysis published by Wiley Periodicals LLC This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Brief Report
Ohtaki, Hirofumi
Takahashi, Akifumi
Niwa, Ayumi
Yonetamari, Jun
Nakayama, Asami
Kuchibiro, Tomokazu
Ohta, Hirotoshi
Ito, Hiroyasu
Baba, Hisashi
Murakami, Nobuo
Ohkusu, Kiyofumi
Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests
title Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests
title_full Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests
title_fullStr Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests
title_full_unstemmed Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests
title_short Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests
title_sort evaluation of presumptive identification of enterobacterales using chromagar orientation medium and rapid biochemical tests
topic Brief Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7595914/
https://www.ncbi.nlm.nih.gov/pubmed/32594571
http://dx.doi.org/10.1002/jcla.23453
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