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Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests
BACKGROUND: The use of matrix‐assisted laser desorption/ionization time‐of‐flight mass spectrometry is gradually spreading among large‐scale laboratories; however, this method is impractical for small‐scale laboratories. In laboratories without access to these rapid identification methods, problems...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7595914/ https://www.ncbi.nlm.nih.gov/pubmed/32594571 http://dx.doi.org/10.1002/jcla.23453 |
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author | Ohtaki, Hirofumi Takahashi, Akifumi Niwa, Ayumi Yonetamari, Jun Nakayama, Asami Kuchibiro, Tomokazu Ohta, Hirotoshi Ito, Hiroyasu Baba, Hisashi Murakami, Nobuo Ohkusu, Kiyofumi |
author_facet | Ohtaki, Hirofumi Takahashi, Akifumi Niwa, Ayumi Yonetamari, Jun Nakayama, Asami Kuchibiro, Tomokazu Ohta, Hirotoshi Ito, Hiroyasu Baba, Hisashi Murakami, Nobuo Ohkusu, Kiyofumi |
author_sort | Ohtaki, Hirofumi |
collection | PubMed |
description | BACKGROUND: The use of matrix‐assisted laser desorption/ionization time‐of‐flight mass spectrometry is gradually spreading among large‐scale laboratories; however, this method is impractical for small‐scale laboratories. In laboratories without access to these rapid identification methods, problems related to them remain unsolved. In this study, we aimed to develop a rapid and inexpensive method to presumptively identify Enterobacterales using CHROMagar Orientation medium. METHODS: The algorithm for presumptive identification of Enterobacteriaceae using CHROMagar Orientation medium was based on our previous studies. Modified property tests for indole, lysine decarboxylase, ornithine decarboxylase, and hydrogen sulfide were performed to evaluate the differentiation of the bacterial species. RESULTS: Using the type strains and clinical isolates, it was possible to conduct the property tests at a low cost, within 4 hours. The spot indole test was performed without any nonspecific reactions for the bacteria forming colored colonies. The presumptive identification of bacteria was thereby possible within 24 hours after specimen submission. CONCLUSION: All these results suggest that the rapid presumptive identification of Enterobacterales is possible with this new identification method using CHROMagar Orientation medium. This is therefore a prompt and economical method that can be used in routine laboratory work. |
format | Online Article Text |
id | pubmed-7595914 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-75959142020-11-02 Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests Ohtaki, Hirofumi Takahashi, Akifumi Niwa, Ayumi Yonetamari, Jun Nakayama, Asami Kuchibiro, Tomokazu Ohta, Hirotoshi Ito, Hiroyasu Baba, Hisashi Murakami, Nobuo Ohkusu, Kiyofumi J Clin Lab Anal Brief Report BACKGROUND: The use of matrix‐assisted laser desorption/ionization time‐of‐flight mass spectrometry is gradually spreading among large‐scale laboratories; however, this method is impractical for small‐scale laboratories. In laboratories without access to these rapid identification methods, problems related to them remain unsolved. In this study, we aimed to develop a rapid and inexpensive method to presumptively identify Enterobacterales using CHROMagar Orientation medium. METHODS: The algorithm for presumptive identification of Enterobacteriaceae using CHROMagar Orientation medium was based on our previous studies. Modified property tests for indole, lysine decarboxylase, ornithine decarboxylase, and hydrogen sulfide were performed to evaluate the differentiation of the bacterial species. RESULTS: Using the type strains and clinical isolates, it was possible to conduct the property tests at a low cost, within 4 hours. The spot indole test was performed without any nonspecific reactions for the bacteria forming colored colonies. The presumptive identification of bacteria was thereby possible within 24 hours after specimen submission. CONCLUSION: All these results suggest that the rapid presumptive identification of Enterobacterales is possible with this new identification method using CHROMagar Orientation medium. This is therefore a prompt and economical method that can be used in routine laboratory work. John Wiley and Sons Inc. 2020-06-28 /pmc/articles/PMC7595914/ /pubmed/32594571 http://dx.doi.org/10.1002/jcla.23453 Text en © 2020 The Authors. Journal of Clinical Laboratory Analysis published by Wiley Periodicals LLC This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Brief Report Ohtaki, Hirofumi Takahashi, Akifumi Niwa, Ayumi Yonetamari, Jun Nakayama, Asami Kuchibiro, Tomokazu Ohta, Hirotoshi Ito, Hiroyasu Baba, Hisashi Murakami, Nobuo Ohkusu, Kiyofumi Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests |
title | Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests |
title_full | Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests |
title_fullStr | Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests |
title_full_unstemmed | Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests |
title_short | Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests |
title_sort | evaluation of presumptive identification of enterobacterales using chromagar orientation medium and rapid biochemical tests |
topic | Brief Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7595914/ https://www.ncbi.nlm.nih.gov/pubmed/32594571 http://dx.doi.org/10.1002/jcla.23453 |
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