Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil

The addition of glucose to soil has long been used to study the metabolic activity of microbes in soil; however, the response of the microbial ecophysiology remains poorly characterized. To address this, we sequenced the metagenomes and metatranscriptomes of glucose-amended soil microbial communitie...

Descripción completa

Detalles Bibliográficos
Autores principales: Chuckran, Peter F., Huntemann, Marcel, Clum, Alicia, Foster, Brian, Foster, Bryce, Roux, Simon, Palaniappan, Krishnaveni, Varghese, Neha, Mukherjee, Supratim, Reddy, T. B. K., Daum, Chris, Copeland, Alex, Ivanova, Natalia N., Kyrpides, Nikos C., del Rio, Tijana Glavina, Eloe-Fadrosh, Emiley A., Morrissey, Ember M., Schwartz, Egbert, Fofanov, Viacheslav, Hungate, Bruce, Dijkstra, Paul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Omics Data Sets
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7595945/
https://www.ncbi.nlm.nih.gov/pubmed/33122409
http://dx.doi.org/10.1128/MRA.00895-20
_version_ 1783601996138283008
author Chuckran, Peter F.
Huntemann, Marcel
Clum, Alicia
Foster, Brian
Foster, Bryce
Roux, Simon
Palaniappan, Krishnaveni
Varghese, Neha
Mukherjee, Supratim
Reddy, T. B. K.
Daum, Chris
Copeland, Alex
Ivanova, Natalia N.
Kyrpides, Nikos C.
del Rio, Tijana Glavina
Eloe-Fadrosh, Emiley A.
Morrissey, Ember M.
Schwartz, Egbert
Fofanov, Viacheslav
Hungate, Bruce
Dijkstra, Paul
author_facet Chuckran, Peter F.
Huntemann, Marcel
Clum, Alicia
Foster, Brian
Foster, Bryce
Roux, Simon
Palaniappan, Krishnaveni
Varghese, Neha
Mukherjee, Supratim
Reddy, T. B. K.
Daum, Chris
Copeland, Alex
Ivanova, Natalia N.
Kyrpides, Nikos C.
del Rio, Tijana Glavina
Eloe-Fadrosh, Emiley A.
Morrissey, Ember M.
Schwartz, Egbert
Fofanov, Viacheslav
Hungate, Bruce
Dijkstra, Paul
author_sort Chuckran, Peter F.
collection PubMed
description The addition of glucose to soil has long been used to study the metabolic activity of microbes in soil; however, the response of the microbial ecophysiology remains poorly characterized. To address this, we sequenced the metagenomes and metatranscriptomes of glucose-amended soil microbial communities in a laboratory incubation.
format Online
Article
Text
id pubmed-7595945
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-75959452020-11-06 Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil Chuckran, Peter F. Huntemann, Marcel Clum, Alicia Foster, Brian Foster, Bryce Roux, Simon Palaniappan, Krishnaveni Varghese, Neha Mukherjee, Supratim Reddy, T. B. K. Daum, Chris Copeland, Alex Ivanova, Natalia N. Kyrpides, Nikos C. del Rio, Tijana Glavina Eloe-Fadrosh, Emiley A. Morrissey, Ember M. Schwartz, Egbert Fofanov, Viacheslav Hungate, Bruce Dijkstra, Paul Microbiol Resour Announc Omics Data Sets The addition of glucose to soil has long been used to study the metabolic activity of microbes in soil; however, the response of the microbial ecophysiology remains poorly characterized. To address this, we sequenced the metagenomes and metatranscriptomes of glucose-amended soil microbial communities in a laboratory incubation. American Society for Microbiology 2020-10-29 /pmc/articles/PMC7595945/ /pubmed/33122409 http://dx.doi.org/10.1128/MRA.00895-20 Text en https://doi.org/10.1128/AuthorWarrantyLicense.v1 This is a work of the U.S. Government and is not subject to copyright protection in the United States. Foreign copyrights may apply.
spellingShingle Omics Data Sets
Chuckran, Peter F.
Huntemann, Marcel
Clum, Alicia
Foster, Brian
Foster, Bryce
Roux, Simon
Palaniappan, Krishnaveni
Varghese, Neha
Mukherjee, Supratim
Reddy, T. B. K.
Daum, Chris
Copeland, Alex
Ivanova, Natalia N.
Kyrpides, Nikos C.
del Rio, Tijana Glavina
Eloe-Fadrosh, Emiley A.
Morrissey, Ember M.
Schwartz, Egbert
Fofanov, Viacheslav
Hungate, Bruce
Dijkstra, Paul
Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil
title Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil
title_full Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil
title_fullStr Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil
title_full_unstemmed Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil
title_short Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil
title_sort metagenomes and metatranscriptomes of a glucose-amended agricultural soil
topic Omics Data Sets
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7595945/
https://www.ncbi.nlm.nih.gov/pubmed/33122409
http://dx.doi.org/10.1128/MRA.00895-20
work_keys_str_mv AT chuckranpeterf metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT huntemannmarcel metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT clumalicia metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT fosterbrian metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT fosterbryce metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT rouxsimon metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT palaniappankrishnaveni metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT vargheseneha metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT mukherjeesupratim metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT reddytbk metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT daumchris metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT copelandalex metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT ivanovanatalian metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT kyrpidesnikosc metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT delriotijanaglavina metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT eloefadroshemileya metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT morrisseyemberm metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT schwartzegbert metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT fofanovviacheslav metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT hungatebruce metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil
AT dijkstrapaul metagenomesandmetatranscriptomesofaglucoseamendedagriculturalsoil

Ejemplares similares