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An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data

Caulobacter crescentus is a model alphaproteobacterium with a well-studied genetic network controlling its cell cycle. Essential for such studies is an accurate map of the expressed features of its genome. Here, we provide an updated map of the expressed RNAs by integrative analysis of 5′ global rap...

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Detalles Bibliográficos
Autores principales: Bharmal, Mohammed-Husain, Aretakis, James R., Schrader, Jared M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7595951/
https://www.ncbi.nlm.nih.gov/pubmed/33122415
http://dx.doi.org/10.1128/MRA.01025-20
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author Bharmal, Mohammed-Husain
Aretakis, James R.
Schrader, Jared M.
author_facet Bharmal, Mohammed-Husain
Aretakis, James R.
Schrader, Jared M.
author_sort Bharmal, Mohammed-Husain
collection PubMed
description Caulobacter crescentus is a model alphaproteobacterium with a well-studied genetic network controlling its cell cycle. Essential for such studies is an accurate map of the expressed features of its genome. Here, we provide an updated map of the expressed RNAs by integrative analysis of 5′ global rapid amplification of cDNA ends, transcriptome sequencing, rifampicin treatment RNA sequencing, and RNA end-enriched sequencing data sets.
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spelling pubmed-75959512020-11-06 An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data Bharmal, Mohammed-Husain Aretakis, James R. Schrader, Jared M. Microbiol Resour Announc Databases and Software Caulobacter crescentus is a model alphaproteobacterium with a well-studied genetic network controlling its cell cycle. Essential for such studies is an accurate map of the expressed features of its genome. Here, we provide an updated map of the expressed RNAs by integrative analysis of 5′ global rapid amplification of cDNA ends, transcriptome sequencing, rifampicin treatment RNA sequencing, and RNA end-enriched sequencing data sets. American Society for Microbiology 2020-10-29 /pmc/articles/PMC7595951/ /pubmed/33122415 http://dx.doi.org/10.1128/MRA.01025-20 Text en Copyright © 2020 Bharmal et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Databases and Software
Bharmal, Mohammed-Husain
Aretakis, James R.
Schrader, Jared M.
An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data
title An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data
title_full An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data
title_fullStr An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data
title_full_unstemmed An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data
title_short An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data
title_sort improved caulobacter crescentus operon annotation based on transcriptome data
topic Databases and Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7595951/
https://www.ncbi.nlm.nih.gov/pubmed/33122415
http://dx.doi.org/10.1128/MRA.01025-20
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