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An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data
Caulobacter crescentus is a model alphaproteobacterium with a well-studied genetic network controlling its cell cycle. Essential for such studies is an accurate map of the expressed features of its genome. Here, we provide an updated map of the expressed RNAs by integrative analysis of 5′ global rap...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Microbiology
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7595951/ https://www.ncbi.nlm.nih.gov/pubmed/33122415 http://dx.doi.org/10.1128/MRA.01025-20 |
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author | Bharmal, Mohammed-Husain Aretakis, James R. Schrader, Jared M. |
author_facet | Bharmal, Mohammed-Husain Aretakis, James R. Schrader, Jared M. |
author_sort | Bharmal, Mohammed-Husain |
collection | PubMed |
description | Caulobacter crescentus is a model alphaproteobacterium with a well-studied genetic network controlling its cell cycle. Essential for such studies is an accurate map of the expressed features of its genome. Here, we provide an updated map of the expressed RNAs by integrative analysis of 5′ global rapid amplification of cDNA ends, transcriptome sequencing, rifampicin treatment RNA sequencing, and RNA end-enriched sequencing data sets. |
format | Online Article Text |
id | pubmed-7595951 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Society for Microbiology |
record_format | MEDLINE/PubMed |
spelling | pubmed-75959512020-11-06 An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data Bharmal, Mohammed-Husain Aretakis, James R. Schrader, Jared M. Microbiol Resour Announc Databases and Software Caulobacter crescentus is a model alphaproteobacterium with a well-studied genetic network controlling its cell cycle. Essential for such studies is an accurate map of the expressed features of its genome. Here, we provide an updated map of the expressed RNAs by integrative analysis of 5′ global rapid amplification of cDNA ends, transcriptome sequencing, rifampicin treatment RNA sequencing, and RNA end-enriched sequencing data sets. American Society for Microbiology 2020-10-29 /pmc/articles/PMC7595951/ /pubmed/33122415 http://dx.doi.org/10.1128/MRA.01025-20 Text en Copyright © 2020 Bharmal et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Databases and Software Bharmal, Mohammed-Husain Aretakis, James R. Schrader, Jared M. An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data |
title | An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data |
title_full | An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data |
title_fullStr | An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data |
title_full_unstemmed | An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data |
title_short | An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data |
title_sort | improved caulobacter crescentus operon annotation based on transcriptome data |
topic | Databases and Software |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7595951/ https://www.ncbi.nlm.nih.gov/pubmed/33122415 http://dx.doi.org/10.1128/MRA.01025-20 |
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