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Efficient simulation of non-Markovian dynamics on complex networks

We study continuous-time multi-agent models, where agents interact according to a network topology. At any point in time, each agent occupies a specific local node state. Agents change their state at random through interactions with neighboring agents. The time until a transition happens can follow...

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Detalles Bibliográficos
Autores principales: Großmann, Gerrit, Bortolussi, Luca, Wolf, Verena
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7598478/
https://www.ncbi.nlm.nih.gov/pubmed/33125408
http://dx.doi.org/10.1371/journal.pone.0241394
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author Großmann, Gerrit
Bortolussi, Luca
Wolf, Verena
author_facet Großmann, Gerrit
Bortolussi, Luca
Wolf, Verena
author_sort Großmann, Gerrit
collection PubMed
description We study continuous-time multi-agent models, where agents interact according to a network topology. At any point in time, each agent occupies a specific local node state. Agents change their state at random through interactions with neighboring agents. The time until a transition happens can follow an arbitrary probability density. Stochastic (Monte-Carlo) simulations are often the preferred—sometimes the only feasible—approach to study the complex emerging dynamical patterns of such systems. However, each simulation run comes with high computational costs mostly due to updating the instantaneous rates of interconnected agents after each transition. This work proposes a stochastic rejection-based, event-driven simulation algorithm that scales extremely well with the size and connectivity of the underlying contact network and produces statistically correct samples. We demonstrate the effectiveness of our method on different information spreading models.
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spelling pubmed-75984782020-11-03 Efficient simulation of non-Markovian dynamics on complex networks Großmann, Gerrit Bortolussi, Luca Wolf, Verena PLoS One Research Article We study continuous-time multi-agent models, where agents interact according to a network topology. At any point in time, each agent occupies a specific local node state. Agents change their state at random through interactions with neighboring agents. The time until a transition happens can follow an arbitrary probability density. Stochastic (Monte-Carlo) simulations are often the preferred—sometimes the only feasible—approach to study the complex emerging dynamical patterns of such systems. However, each simulation run comes with high computational costs mostly due to updating the instantaneous rates of interconnected agents after each transition. This work proposes a stochastic rejection-based, event-driven simulation algorithm that scales extremely well with the size and connectivity of the underlying contact network and produces statistically correct samples. We demonstrate the effectiveness of our method on different information spreading models. Public Library of Science 2020-10-30 /pmc/articles/PMC7598478/ /pubmed/33125408 http://dx.doi.org/10.1371/journal.pone.0241394 Text en © 2020 Großmann et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Großmann, Gerrit
Bortolussi, Luca
Wolf, Verena
Efficient simulation of non-Markovian dynamics on complex networks
title Efficient simulation of non-Markovian dynamics on complex networks
title_full Efficient simulation of non-Markovian dynamics on complex networks
title_fullStr Efficient simulation of non-Markovian dynamics on complex networks
title_full_unstemmed Efficient simulation of non-Markovian dynamics on complex networks
title_short Efficient simulation of non-Markovian dynamics on complex networks
title_sort efficient simulation of non-markovian dynamics on complex networks
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7598478/
https://www.ncbi.nlm.nih.gov/pubmed/33125408
http://dx.doi.org/10.1371/journal.pone.0241394
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