Cargando…

Haloferax profundi sp. nov. and Haloferax marisrubri sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea

Two extremely halophilic archaeal strains, designated SB29(T) and SB3(T), were isolated from the brine-seawater interface of Discovery Deep in the Red Sea. Cells of both strains were pleomorphic (irregular polyhedrals, ovals, and rods) and stained Gram-negative; colonies were pigmented pink. The seq...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Guishan, Dong, Xiaoyan, Sun, Yingjiao, Antunes, André, Hikmawan, Tyas, Haroon, Mohamed Fauzi, Wang, Junru, Stingl, Ulrich
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7599478/
https://www.ncbi.nlm.nih.gov/pubmed/32992953
http://dx.doi.org/10.3390/microorganisms8101475
_version_ 1783602884442587136
author Zhang, Guishan
Dong, Xiaoyan
Sun, Yingjiao
Antunes, André
Hikmawan, Tyas
Haroon, Mohamed Fauzi
Wang, Junru
Stingl, Ulrich
author_facet Zhang, Guishan
Dong, Xiaoyan
Sun, Yingjiao
Antunes, André
Hikmawan, Tyas
Haroon, Mohamed Fauzi
Wang, Junru
Stingl, Ulrich
author_sort Zhang, Guishan
collection PubMed
description Two extremely halophilic archaeal strains, designated SB29(T) and SB3(T), were isolated from the brine-seawater interface of Discovery Deep in the Red Sea. Cells of both strains were pleomorphic (irregular polyhedrals, ovals, and rods) and stained Gram-negative; colonies were pigmented pink. The sequence similarity of the 16S rRNA gene of strain SB29(T) with that of its most closely related validly described species (Hfx. sulfurifontis DSM 16227(T)) and that of strain SB3(T) with its closest validly described relative (Hfx. denitrificans ATCC 35960(T)) was 98.1% and 98.6%, respectively. The incomplete draft genomes of SB29(T) and SB3(T) are 3,871,125 bp and 3,904,985 bp in size, respectively, and their DNA G + C contents are 60.75% and 65.64%, respectively. The highest ANI values between the genomes of SB29(T) and SB3(T) and the most closely related genomes in GenBank were determined as 82.6% (Hfx. sulfurifontis ATCC BAA-897(T), GenBank accession no. GCA_000337835.1) and 92.6% (Haloferax denitrificans ATCC 35960(T), GenBank accession no. GCA_000337795.1), respectively. These data indicate that the two new isolates cannot be classified into any recognized species of the genus Haloferax, and, therefore, two novel species of the genus Haloferax are proposed: Haloferax profundi sp. nov. (type strain SB29(T) = JCM 19567(T) = CGMCC 1.14960(T)) and Haloferax marisrubri sp. nov. (type strain SB3(T) = JCM 19566(T) = CGMCC 1.14958(T)).
format Online
Article
Text
id pubmed-7599478
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-75994782020-11-01 Haloferax profundi sp. nov. and Haloferax marisrubri sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea Zhang, Guishan Dong, Xiaoyan Sun, Yingjiao Antunes, André Hikmawan, Tyas Haroon, Mohamed Fauzi Wang, Junru Stingl, Ulrich Microorganisms Article Two extremely halophilic archaeal strains, designated SB29(T) and SB3(T), were isolated from the brine-seawater interface of Discovery Deep in the Red Sea. Cells of both strains were pleomorphic (irregular polyhedrals, ovals, and rods) and stained Gram-negative; colonies were pigmented pink. The sequence similarity of the 16S rRNA gene of strain SB29(T) with that of its most closely related validly described species (Hfx. sulfurifontis DSM 16227(T)) and that of strain SB3(T) with its closest validly described relative (Hfx. denitrificans ATCC 35960(T)) was 98.1% and 98.6%, respectively. The incomplete draft genomes of SB29(T) and SB3(T) are 3,871,125 bp and 3,904,985 bp in size, respectively, and their DNA G + C contents are 60.75% and 65.64%, respectively. The highest ANI values between the genomes of SB29(T) and SB3(T) and the most closely related genomes in GenBank were determined as 82.6% (Hfx. sulfurifontis ATCC BAA-897(T), GenBank accession no. GCA_000337835.1) and 92.6% (Haloferax denitrificans ATCC 35960(T), GenBank accession no. GCA_000337795.1), respectively. These data indicate that the two new isolates cannot be classified into any recognized species of the genus Haloferax, and, therefore, two novel species of the genus Haloferax are proposed: Haloferax profundi sp. nov. (type strain SB29(T) = JCM 19567(T) = CGMCC 1.14960(T)) and Haloferax marisrubri sp. nov. (type strain SB3(T) = JCM 19566(T) = CGMCC 1.14958(T)). MDPI 2020-09-25 /pmc/articles/PMC7599478/ /pubmed/32992953 http://dx.doi.org/10.3390/microorganisms8101475 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhang, Guishan
Dong, Xiaoyan
Sun, Yingjiao
Antunes, André
Hikmawan, Tyas
Haroon, Mohamed Fauzi
Wang, Junru
Stingl, Ulrich
Haloferax profundi sp. nov. and Haloferax marisrubri sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea
title Haloferax profundi sp. nov. and Haloferax marisrubri sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea
title_full Haloferax profundi sp. nov. and Haloferax marisrubri sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea
title_fullStr Haloferax profundi sp. nov. and Haloferax marisrubri sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea
title_full_unstemmed Haloferax profundi sp. nov. and Haloferax marisrubri sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea
title_short Haloferax profundi sp. nov. and Haloferax marisrubri sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea
title_sort haloferax profundi sp. nov. and haloferax marisrubri sp. nov., isolated from the discovery deep brine-seawater interface in the red sea
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7599478/
https://www.ncbi.nlm.nih.gov/pubmed/32992953
http://dx.doi.org/10.3390/microorganisms8101475
work_keys_str_mv AT zhangguishan haloferaxprofundispnovandhaloferaxmarisrubrispnovisolatedfromthediscoverydeepbrineseawaterinterfaceintheredsea
AT dongxiaoyan haloferaxprofundispnovandhaloferaxmarisrubrispnovisolatedfromthediscoverydeepbrineseawaterinterfaceintheredsea
AT sunyingjiao haloferaxprofundispnovandhaloferaxmarisrubrispnovisolatedfromthediscoverydeepbrineseawaterinterfaceintheredsea
AT antunesandre haloferaxprofundispnovandhaloferaxmarisrubrispnovisolatedfromthediscoverydeepbrineseawaterinterfaceintheredsea
AT hikmawantyas haloferaxprofundispnovandhaloferaxmarisrubrispnovisolatedfromthediscoverydeepbrineseawaterinterfaceintheredsea
AT haroonmohamedfauzi haloferaxprofundispnovandhaloferaxmarisrubrispnovisolatedfromthediscoverydeepbrineseawaterinterfaceintheredsea
AT wangjunru haloferaxprofundispnovandhaloferaxmarisrubrispnovisolatedfromthediscoverydeepbrineseawaterinterfaceintheredsea
AT stinglulrich haloferaxprofundispnovandhaloferaxmarisrubrispnovisolatedfromthediscoverydeepbrineseawaterinterfaceintheredsea