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Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis
The large-conductance voltage- and Ca [Formula: see text]-activated [Formula: see text] channels (BK) are encoded in humans by the Kcnma1 gene. Nevertheless, BK channel isoforms in different locations can exhibit functional heterogeneity mainly due to the alternative splicing during the Kcnma1 gene...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7602617/ https://www.ncbi.nlm.nih.gov/pubmed/33076484 http://dx.doi.org/10.3390/cells9102305 |
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author | Wawrzkiewicz-Jałowiecka, Agata Trybek, Paulina Borys, Przemysław Dworakowska, Beata Machura, Łukasz Bednarczyk, Piotr |
author_facet | Wawrzkiewicz-Jałowiecka, Agata Trybek, Paulina Borys, Przemysław Dworakowska, Beata Machura, Łukasz Bednarczyk, Piotr |
author_sort | Wawrzkiewicz-Jałowiecka, Agata |
collection | PubMed |
description | The large-conductance voltage- and Ca [Formula: see text]-activated [Formula: see text] channels (BK) are encoded in humans by the Kcnma1 gene. Nevertheless, BK channel isoforms in different locations can exhibit functional heterogeneity mainly due to the alternative splicing during the Kcnma1 gene transcription. Here, we would like to examine the existence of dynamic diversity of BK channels from the inner mitochondrial and cellular membrane from human glioblastoma (U-87 MG). Not only the standard characteristics of the spontaneous switching between the functional states of the channel is discussed, but we put a special emphasis on the presence and strength of correlations within the signal describing the single-channel activity. The considered short- and long-range memory effects are here analyzed as they can be interpreted in terms of the complexity of the switching mechanism between stable conformational states of the channel. We calculate the dependencies of mean dwell-times of (conducting/non-conducting) states on the duration of the previous state, Hurst exponents by the rescaled range R/S method and detrended fluctuation analysis (DFA), and use the multifractal extension of the DFA (MFDFA) for the series describing single-channel activity. The obtained results unraveled statistically significant diversity in gating machinery between the mitochondrial and cellular BK channels. |
format | Online Article Text |
id | pubmed-7602617 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-76026172020-11-01 Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis Wawrzkiewicz-Jałowiecka, Agata Trybek, Paulina Borys, Przemysław Dworakowska, Beata Machura, Łukasz Bednarczyk, Piotr Cells Article The large-conductance voltage- and Ca [Formula: see text]-activated [Formula: see text] channels (BK) are encoded in humans by the Kcnma1 gene. Nevertheless, BK channel isoforms in different locations can exhibit functional heterogeneity mainly due to the alternative splicing during the Kcnma1 gene transcription. Here, we would like to examine the existence of dynamic diversity of BK channels from the inner mitochondrial and cellular membrane from human glioblastoma (U-87 MG). Not only the standard characteristics of the spontaneous switching between the functional states of the channel is discussed, but we put a special emphasis on the presence and strength of correlations within the signal describing the single-channel activity. The considered short- and long-range memory effects are here analyzed as they can be interpreted in terms of the complexity of the switching mechanism between stable conformational states of the channel. We calculate the dependencies of mean dwell-times of (conducting/non-conducting) states on the duration of the previous state, Hurst exponents by the rescaled range R/S method and detrended fluctuation analysis (DFA), and use the multifractal extension of the DFA (MFDFA) for the series describing single-channel activity. The obtained results unraveled statistically significant diversity in gating machinery between the mitochondrial and cellular BK channels. MDPI 2020-10-15 /pmc/articles/PMC7602617/ /pubmed/33076484 http://dx.doi.org/10.3390/cells9102305 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Wawrzkiewicz-Jałowiecka, Agata Trybek, Paulina Borys, Przemysław Dworakowska, Beata Machura, Łukasz Bednarczyk, Piotr Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis |
title | Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis |
title_full | Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis |
title_fullStr | Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis |
title_full_unstemmed | Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis |
title_short | Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis |
title_sort | differences in gating dynamics of bk channels in cellular and mitochondrial membranes from human glioblastoma cells unraveled by short- and long-range correlations analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7602617/ https://www.ncbi.nlm.nih.gov/pubmed/33076484 http://dx.doi.org/10.3390/cells9102305 |
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