Cargando…

Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis

The large-conductance voltage- and Ca [Formula: see text]-activated [Formula: see text] channels (BK) are encoded in humans by the Kcnma1 gene. Nevertheless, BK channel isoforms in different locations can exhibit functional heterogeneity mainly due to the alternative splicing during the Kcnma1 gene...

Descripción completa

Detalles Bibliográficos
Autores principales: Wawrzkiewicz-Jałowiecka, Agata, Trybek, Paulina, Borys, Przemysław, Dworakowska, Beata, Machura, Łukasz, Bednarczyk, Piotr
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7602617/
https://www.ncbi.nlm.nih.gov/pubmed/33076484
http://dx.doi.org/10.3390/cells9102305
_version_ 1783603724438994944
author Wawrzkiewicz-Jałowiecka, Agata
Trybek, Paulina
Borys, Przemysław
Dworakowska, Beata
Machura, Łukasz
Bednarczyk, Piotr
author_facet Wawrzkiewicz-Jałowiecka, Agata
Trybek, Paulina
Borys, Przemysław
Dworakowska, Beata
Machura, Łukasz
Bednarczyk, Piotr
author_sort Wawrzkiewicz-Jałowiecka, Agata
collection PubMed
description The large-conductance voltage- and Ca [Formula: see text]-activated [Formula: see text] channels (BK) are encoded in humans by the Kcnma1 gene. Nevertheless, BK channel isoforms in different locations can exhibit functional heterogeneity mainly due to the alternative splicing during the Kcnma1 gene transcription. Here, we would like to examine the existence of dynamic diversity of BK channels from the inner mitochondrial and cellular membrane from human glioblastoma (U-87 MG). Not only the standard characteristics of the spontaneous switching between the functional states of the channel is discussed, but we put a special emphasis on the presence and strength of correlations within the signal describing the single-channel activity. The considered short- and long-range memory effects are here analyzed as they can be interpreted in terms of the complexity of the switching mechanism between stable conformational states of the channel. We calculate the dependencies of mean dwell-times of (conducting/non-conducting) states on the duration of the previous state, Hurst exponents by the rescaled range R/S method and detrended fluctuation analysis (DFA), and use the multifractal extension of the DFA (MFDFA) for the series describing single-channel activity. The obtained results unraveled statistically significant diversity in gating machinery between the mitochondrial and cellular BK channels.
format Online
Article
Text
id pubmed-7602617
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-76026172020-11-01 Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis Wawrzkiewicz-Jałowiecka, Agata Trybek, Paulina Borys, Przemysław Dworakowska, Beata Machura, Łukasz Bednarczyk, Piotr Cells Article The large-conductance voltage- and Ca [Formula: see text]-activated [Formula: see text] channels (BK) are encoded in humans by the Kcnma1 gene. Nevertheless, BK channel isoforms in different locations can exhibit functional heterogeneity mainly due to the alternative splicing during the Kcnma1 gene transcription. Here, we would like to examine the existence of dynamic diversity of BK channels from the inner mitochondrial and cellular membrane from human glioblastoma (U-87 MG). Not only the standard characteristics of the spontaneous switching between the functional states of the channel is discussed, but we put a special emphasis on the presence and strength of correlations within the signal describing the single-channel activity. The considered short- and long-range memory effects are here analyzed as they can be interpreted in terms of the complexity of the switching mechanism between stable conformational states of the channel. We calculate the dependencies of mean dwell-times of (conducting/non-conducting) states on the duration of the previous state, Hurst exponents by the rescaled range R/S method and detrended fluctuation analysis (DFA), and use the multifractal extension of the DFA (MFDFA) for the series describing single-channel activity. The obtained results unraveled statistically significant diversity in gating machinery between the mitochondrial and cellular BK channels. MDPI 2020-10-15 /pmc/articles/PMC7602617/ /pubmed/33076484 http://dx.doi.org/10.3390/cells9102305 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wawrzkiewicz-Jałowiecka, Agata
Trybek, Paulina
Borys, Przemysław
Dworakowska, Beata
Machura, Łukasz
Bednarczyk, Piotr
Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis
title Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis
title_full Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis
title_fullStr Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis
title_full_unstemmed Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis
title_short Differences in Gating Dynamics of BK Channels in Cellular and Mitochondrial Membranes from Human Glioblastoma Cells Unraveled by Short- and Long-Range Correlations Analysis
title_sort differences in gating dynamics of bk channels in cellular and mitochondrial membranes from human glioblastoma cells unraveled by short- and long-range correlations analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7602617/
https://www.ncbi.nlm.nih.gov/pubmed/33076484
http://dx.doi.org/10.3390/cells9102305
work_keys_str_mv AT wawrzkiewiczjałowieckaagata differencesingatingdynamicsofbkchannelsincellularandmitochondrialmembranesfromhumanglioblastomacellsunraveledbyshortandlongrangecorrelationsanalysis
AT trybekpaulina differencesingatingdynamicsofbkchannelsincellularandmitochondrialmembranesfromhumanglioblastomacellsunraveledbyshortandlongrangecorrelationsanalysis
AT borysprzemysław differencesingatingdynamicsofbkchannelsincellularandmitochondrialmembranesfromhumanglioblastomacellsunraveledbyshortandlongrangecorrelationsanalysis
AT dworakowskabeata differencesingatingdynamicsofbkchannelsincellularandmitochondrialmembranesfromhumanglioblastomacellsunraveledbyshortandlongrangecorrelationsanalysis
AT machurałukasz differencesingatingdynamicsofbkchannelsincellularandmitochondrialmembranesfromhumanglioblastomacellsunraveledbyshortandlongrangecorrelationsanalysis
AT bednarczykpiotr differencesingatingdynamicsofbkchannelsincellularandmitochondrialmembranesfromhumanglioblastomacellsunraveledbyshortandlongrangecorrelationsanalysis