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Automatic COVID-19 lung infected region segmentation and measurement using CT-scans images

History shows that the infectious disease (COVID-19) can stun the world quickly, causing massive losses to health, resulting in a profound impact on the lives of billions of people, from both a safety and an economic perspective, for controlling the COVID-19 pandemic. The best strategy is to provide...

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Autores principales: Oulefki, Adel, Agaian, Sos, Trongtirakul, Thaweesak, Kassah Laouar, Azzeddine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7605758/
https://www.ncbi.nlm.nih.gov/pubmed/33162612
http://dx.doi.org/10.1016/j.patcog.2020.107747
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author Oulefki, Adel
Agaian, Sos
Trongtirakul, Thaweesak
Kassah Laouar, Azzeddine
author_facet Oulefki, Adel
Agaian, Sos
Trongtirakul, Thaweesak
Kassah Laouar, Azzeddine
author_sort Oulefki, Adel
collection PubMed
description History shows that the infectious disease (COVID-19) can stun the world quickly, causing massive losses to health, resulting in a profound impact on the lives of billions of people, from both a safety and an economic perspective, for controlling the COVID-19 pandemic. The best strategy is to provide early intervention to stop the spread of the disease. In general, Computer Tomography (CT) is used to detect tumors in pneumonia, lungs, tuberculosis, emphysema, or other pleura (the membrane covering the lungs) diseases. Disadvantages of CT imaging system are: inferior soft tissue contrast compared to MRI as it is X-ray-based Radiation exposure. Lung CT image segmentation is a necessary initial step for lung image analysis. The main challenges of segmentation algorithms exaggerated due to intensity in-homogeneity, presence of artifacts, and closeness in the gray level of different soft tissue. The goal of this paper is to design and evaluate an automatic tool for automatic COVID-19 Lung Infection segmentation and measurement using chest CT images. The extensive computer simulations show better efficiency and flexibility of this end-to-end learning approach on CT image segmentation with image enhancement comparing to the state of the art segmentation approaches, namely GraphCut, Medical Image Segmentation (MIS), and Watershed. Experiments performed on COVID-CT-Dataset containing (275) CT scans that are positive for COVID-19 and new data acquired from the EL-BAYANE center for Radiology and Medical Imaging. The means of statistical measures obtained using the accuracy, sensitivity, F-measure, precision, MCC, Dice, Jacquard, and specificity are 0.98, 0.73, 0.71, 0.73, 0.71, 0.71, 0.57, 0.99 respectively; which is better than methods mentioned above. The achieved results prove that the proposed approach is more robust, accurate, and straightforward.
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spelling pubmed-76057582020-11-03 Automatic COVID-19 lung infected region segmentation and measurement using CT-scans images Oulefki, Adel Agaian, Sos Trongtirakul, Thaweesak Kassah Laouar, Azzeddine Pattern Recognit Article History shows that the infectious disease (COVID-19) can stun the world quickly, causing massive losses to health, resulting in a profound impact on the lives of billions of people, from both a safety and an economic perspective, for controlling the COVID-19 pandemic. The best strategy is to provide early intervention to stop the spread of the disease. In general, Computer Tomography (CT) is used to detect tumors in pneumonia, lungs, tuberculosis, emphysema, or other pleura (the membrane covering the lungs) diseases. Disadvantages of CT imaging system are: inferior soft tissue contrast compared to MRI as it is X-ray-based Radiation exposure. Lung CT image segmentation is a necessary initial step for lung image analysis. The main challenges of segmentation algorithms exaggerated due to intensity in-homogeneity, presence of artifacts, and closeness in the gray level of different soft tissue. The goal of this paper is to design and evaluate an automatic tool for automatic COVID-19 Lung Infection segmentation and measurement using chest CT images. The extensive computer simulations show better efficiency and flexibility of this end-to-end learning approach on CT image segmentation with image enhancement comparing to the state of the art segmentation approaches, namely GraphCut, Medical Image Segmentation (MIS), and Watershed. Experiments performed on COVID-CT-Dataset containing (275) CT scans that are positive for COVID-19 and new data acquired from the EL-BAYANE center for Radiology and Medical Imaging. The means of statistical measures obtained using the accuracy, sensitivity, F-measure, precision, MCC, Dice, Jacquard, and specificity are 0.98, 0.73, 0.71, 0.73, 0.71, 0.71, 0.57, 0.99 respectively; which is better than methods mentioned above. The achieved results prove that the proposed approach is more robust, accurate, and straightforward. Elsevier Ltd. 2021-06 2020-11-02 /pmc/articles/PMC7605758/ /pubmed/33162612 http://dx.doi.org/10.1016/j.patcog.2020.107747 Text en © 2020 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Oulefki, Adel
Agaian, Sos
Trongtirakul, Thaweesak
Kassah Laouar, Azzeddine
Automatic COVID-19 lung infected region segmentation and measurement using CT-scans images
title Automatic COVID-19 lung infected region segmentation and measurement using CT-scans images
title_full Automatic COVID-19 lung infected region segmentation and measurement using CT-scans images
title_fullStr Automatic COVID-19 lung infected region segmentation and measurement using CT-scans images
title_full_unstemmed Automatic COVID-19 lung infected region segmentation and measurement using CT-scans images
title_short Automatic COVID-19 lung infected region segmentation and measurement using CT-scans images
title_sort automatic covid-19 lung infected region segmentation and measurement using ct-scans images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7605758/
https://www.ncbi.nlm.nih.gov/pubmed/33162612
http://dx.doi.org/10.1016/j.patcog.2020.107747
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