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Predicting the number of total COVID-19 cases and deaths in Brazil by the Gompertz model

In this work, we estimate the total number of infected and deaths by COVID-19 in Brazil and two Brazilian States (Rio de Janeiro and Sao Paulo). To obtain the unknown data, we use an iterative method in the Gompertz model, whose formulation is well known in the field of biology. Based on data collec...

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Autor principal: Valle, Jemy A. Mandujano
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7606032/
https://www.ncbi.nlm.nih.gov/pubmed/33162673
http://dx.doi.org/10.1007/s11071-020-06056-w
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author Valle, Jemy A. Mandujano
author_facet Valle, Jemy A. Mandujano
author_sort Valle, Jemy A. Mandujano
collection PubMed
description In this work, we estimate the total number of infected and deaths by COVID-19 in Brazil and two Brazilian States (Rio de Janeiro and Sao Paulo). To obtain the unknown data, we use an iterative method in the Gompertz model, whose formulation is well known in the field of biology. Based on data collected from the Ministry of Health from February 26, 2020, to July 2, 2020, we predict, from July 3 to 9 and at the end of the epidemic, the number of infected and killed for the whole country and for the Brazilian states of Sao Paulo and Rio de Janeiro. We estimate, until July 9, 2020, a total of 1,709,755 cases and 65,384 deaths in Brazil, 331,718 cases and 15,621 deaths in Sao Paulo, 134,454 cases and 11,574 deaths in Rio de Janeiro. We also estimate the basic reproduction number [Formula: see text] for Brazil and its two states. The estimated values [Formula: see text] were 1.3, 1.3, and 1.4 for Brazil, Sao Paulo, and Rio de Janeiro, respectively. The results show a good fit between the observed data and those obtained by the Gompertz. The proposed methodology can also be applied to other countries and Brazilian states, and we provide an executable as well as the source code for a straightforward application of the method on such data.
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spelling pubmed-76060322020-11-03 Predicting the number of total COVID-19 cases and deaths in Brazil by the Gompertz model Valle, Jemy A. Mandujano Nonlinear Dyn Original Paper In this work, we estimate the total number of infected and deaths by COVID-19 in Brazil and two Brazilian States (Rio de Janeiro and Sao Paulo). To obtain the unknown data, we use an iterative method in the Gompertz model, whose formulation is well known in the field of biology. Based on data collected from the Ministry of Health from February 26, 2020, to July 2, 2020, we predict, from July 3 to 9 and at the end of the epidemic, the number of infected and killed for the whole country and for the Brazilian states of Sao Paulo and Rio de Janeiro. We estimate, until July 9, 2020, a total of 1,709,755 cases and 65,384 deaths in Brazil, 331,718 cases and 15,621 deaths in Sao Paulo, 134,454 cases and 11,574 deaths in Rio de Janeiro. We also estimate the basic reproduction number [Formula: see text] for Brazil and its two states. The estimated values [Formula: see text] were 1.3, 1.3, and 1.4 for Brazil, Sao Paulo, and Rio de Janeiro, respectively. The results show a good fit between the observed data and those obtained by the Gompertz. The proposed methodology can also be applied to other countries and Brazilian states, and we provide an executable as well as the source code for a straightforward application of the method on such data. Springer Netherlands 2020-11-03 2020 /pmc/articles/PMC7606032/ /pubmed/33162673 http://dx.doi.org/10.1007/s11071-020-06056-w Text en © Springer Nature B.V. 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Paper
Valle, Jemy A. Mandujano
Predicting the number of total COVID-19 cases and deaths in Brazil by the Gompertz model
title Predicting the number of total COVID-19 cases and deaths in Brazil by the Gompertz model
title_full Predicting the number of total COVID-19 cases and deaths in Brazil by the Gompertz model
title_fullStr Predicting the number of total COVID-19 cases and deaths in Brazil by the Gompertz model
title_full_unstemmed Predicting the number of total COVID-19 cases and deaths in Brazil by the Gompertz model
title_short Predicting the number of total COVID-19 cases and deaths in Brazil by the Gompertz model
title_sort predicting the number of total covid-19 cases and deaths in brazil by the gompertz model
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7606032/
https://www.ncbi.nlm.nih.gov/pubmed/33162673
http://dx.doi.org/10.1007/s11071-020-06056-w
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