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Deciphering Cancer Cell Behavior From Motility and Shape Features: Peer Prediction and Dynamic Selection to Support Cancer Diagnosis and Therapy
Cell motility varies according to intrinsic features and microenvironmental stimuli, being a signature of underlying biological phenomena. The heterogeneity in cell response, due to multilevel cell diversity especially relevant in cancer, poses a challenge in identifying the biological scenario from...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7606946/ https://www.ncbi.nlm.nih.gov/pubmed/33194709 http://dx.doi.org/10.3389/fonc.2020.580698 |
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author | D'Orazio, Michele Corsi, Francesca Mencattini, Arianna Di Giuseppe, Davide Colomba Comes, Maria Casti, Paola Filippi, Joanna Di Natale, Corrado Ghibelli, Lina Martinelli, Eugenio |
author_facet | D'Orazio, Michele Corsi, Francesca Mencattini, Arianna Di Giuseppe, Davide Colomba Comes, Maria Casti, Paola Filippi, Joanna Di Natale, Corrado Ghibelli, Lina Martinelli, Eugenio |
author_sort | D'Orazio, Michele |
collection | PubMed |
description | Cell motility varies according to intrinsic features and microenvironmental stimuli, being a signature of underlying biological phenomena. The heterogeneity in cell response, due to multilevel cell diversity especially relevant in cancer, poses a challenge in identifying the biological scenario from cell trajectories. We propose here a novel peer prediction strategy among cell trajectories, deciphering cell state (tumor vs. nontumor), tumor stage, and response to the anticancer drug etoposide, based on morphology and motility features, solving the strong heterogeneity of individual cell properties. The proposed approach first barcodes cell trajectories, then automatically selects the good ones for optimal model construction (good teacher and test sample selection), and finally extracts a collective response from the heterogeneous populations via cooperative learning approaches, discriminating with high accuracy prostate noncancer vs. cancer cells of high vs. low malignancy. Comparison with standard classification methods validates our approach, which therefore represents a promising tool for addressing clinically relevant issues in cancer diagnosis and therapy, e.g., detection of potentially metastatic cells and anticancer drug screening. |
format | Online Article Text |
id | pubmed-7606946 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-76069462020-11-13 Deciphering Cancer Cell Behavior From Motility and Shape Features: Peer Prediction and Dynamic Selection to Support Cancer Diagnosis and Therapy D'Orazio, Michele Corsi, Francesca Mencattini, Arianna Di Giuseppe, Davide Colomba Comes, Maria Casti, Paola Filippi, Joanna Di Natale, Corrado Ghibelli, Lina Martinelli, Eugenio Front Oncol Oncology Cell motility varies according to intrinsic features and microenvironmental stimuli, being a signature of underlying biological phenomena. The heterogeneity in cell response, due to multilevel cell diversity especially relevant in cancer, poses a challenge in identifying the biological scenario from cell trajectories. We propose here a novel peer prediction strategy among cell trajectories, deciphering cell state (tumor vs. nontumor), tumor stage, and response to the anticancer drug etoposide, based on morphology and motility features, solving the strong heterogeneity of individual cell properties. The proposed approach first barcodes cell trajectories, then automatically selects the good ones for optimal model construction (good teacher and test sample selection), and finally extracts a collective response from the heterogeneous populations via cooperative learning approaches, discriminating with high accuracy prostate noncancer vs. cancer cells of high vs. low malignancy. Comparison with standard classification methods validates our approach, which therefore represents a promising tool for addressing clinically relevant issues in cancer diagnosis and therapy, e.g., detection of potentially metastatic cells and anticancer drug screening. Frontiers Media S.A. 2020-10-20 /pmc/articles/PMC7606946/ /pubmed/33194709 http://dx.doi.org/10.3389/fonc.2020.580698 Text en Copyright © 2020 D'Orazio, Corsi, Mencattini, Di Giuseppe, Colomba Comes, Casti, Filippi, Di Natale, Ghibelli and Martinelli. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology D'Orazio, Michele Corsi, Francesca Mencattini, Arianna Di Giuseppe, Davide Colomba Comes, Maria Casti, Paola Filippi, Joanna Di Natale, Corrado Ghibelli, Lina Martinelli, Eugenio Deciphering Cancer Cell Behavior From Motility and Shape Features: Peer Prediction and Dynamic Selection to Support Cancer Diagnosis and Therapy |
title | Deciphering Cancer Cell Behavior From Motility and Shape Features: Peer Prediction and Dynamic Selection to Support Cancer Diagnosis and Therapy |
title_full | Deciphering Cancer Cell Behavior From Motility and Shape Features: Peer Prediction and Dynamic Selection to Support Cancer Diagnosis and Therapy |
title_fullStr | Deciphering Cancer Cell Behavior From Motility and Shape Features: Peer Prediction and Dynamic Selection to Support Cancer Diagnosis and Therapy |
title_full_unstemmed | Deciphering Cancer Cell Behavior From Motility and Shape Features: Peer Prediction and Dynamic Selection to Support Cancer Diagnosis and Therapy |
title_short | Deciphering Cancer Cell Behavior From Motility and Shape Features: Peer Prediction and Dynamic Selection to Support Cancer Diagnosis and Therapy |
title_sort | deciphering cancer cell behavior from motility and shape features: peer prediction and dynamic selection to support cancer diagnosis and therapy |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7606946/ https://www.ncbi.nlm.nih.gov/pubmed/33194709 http://dx.doi.org/10.3389/fonc.2020.580698 |
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