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The values of AHCY and CBS promoter methylation on the diagnosis of cerebral infarction in Chinese Han population
BACKGROUND: The goal of our study is to investigate whether the methylation levels of AHCY and CBS promoters are related to the risk of cerebral infarction by detecting the methylation level of AHCY and CBS genes. METHODS: We extracted peripheral venous blood from 152 patients with cerebral infarcti...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7607831/ https://www.ncbi.nlm.nih.gov/pubmed/33138824 http://dx.doi.org/10.1186/s12920-020-00798-7 |
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author | Li, Xiaodong Bu, Shufang Pan, Ran Ran Zhou, Cong Qu, Kun Ying, Xiuru Zhong, Jie Xiao, Jianhao Yuan, Qian Zhang, Simiao Tipton, Laura Wang, Yunliang Deng, Youping Duan, Shiwei |
author_facet | Li, Xiaodong Bu, Shufang Pan, Ran Ran Zhou, Cong Qu, Kun Ying, Xiuru Zhong, Jie Xiao, Jianhao Yuan, Qian Zhang, Simiao Tipton, Laura Wang, Yunliang Deng, Youping Duan, Shiwei |
author_sort | Li, Xiaodong |
collection | PubMed |
description | BACKGROUND: The goal of our study is to investigate whether the methylation levels of AHCY and CBS promoters are related to the risk of cerebral infarction by detecting the methylation level of AHCY and CBS genes. METHODS: We extracted peripheral venous blood from 152 patients with cerebral infarction and 152 gender- and age-matched healthy controls, and determined methylation levels of AHCY and CBS promoters using quantitative methylation-specific polymerase chain reaction. We used the percentage of methylation reference (PMR) to indicate gene methylation level. RESULTS: We compared the promoter methylation levels of two genes (AHCY and CBS) in peripheral blood DNA between the cerebral infarction case group and the control group. Our study showed no significant difference in AHCY promoter methylation between case and control. Subgroup analysis by gender showed that the methylation level of AHCY in males in the case group was lower than that in the control group, but the difference was not statistically significant in females. In a subgroup analysis by age, there was no significant difference in the AHCY methylation level between the case and control in the young group (≤44 years old). However, the level of AHCY gene methylation in the middle-aged group (45–59 years old) was significantly higher and the aged group (≥60 years old) was significantly lower than that in the control groups. However, CBS promoter methylation levels were significantly lower in the case group than in the control group (median PMR: 70.20% vs 104.10%, P = 3.71E-10). In addition, the CBS methylation levels of males and females in the case group were significantly lower than those in the control group (male: 64.33% vs 105%, P = 2.667E-08; female: 78.05% vs 102.8%, P = 0.003). We also found that the CBS levels in the young (23–44), middle-aged (45–59), and older (60–90) groups were significantly lower than those in the control group (young group: 69.97% vs 114.71%; P = 0.015; middle-aged group: 56.04% vs 91.71%; P = 6.744E-06; older group: 81.6% vs 119.35%; P = 2.644E-04). Our ROC curve analysis of CBS hypomethylation showed an area under the curve of 0.713, a sensitivity of 67.4%, and a specificity of 74.0%. CONCLUSION: Our study suggests that hypomethylation of the CBS promoter may be closely related to the risk of cerebral infarction and may be used as a non-invasive diagnostic biomarker for cerebral infarction. |
format | Online Article Text |
id | pubmed-7607831 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-76078312020-11-03 The values of AHCY and CBS promoter methylation on the diagnosis of cerebral infarction in Chinese Han population Li, Xiaodong Bu, Shufang Pan, Ran Ran Zhou, Cong Qu, Kun Ying, Xiuru Zhong, Jie Xiao, Jianhao Yuan, Qian Zhang, Simiao Tipton, Laura Wang, Yunliang Deng, Youping Duan, Shiwei BMC Med Genomics Research Article BACKGROUND: The goal of our study is to investigate whether the methylation levels of AHCY and CBS promoters are related to the risk of cerebral infarction by detecting the methylation level of AHCY and CBS genes. METHODS: We extracted peripheral venous blood from 152 patients with cerebral infarction and 152 gender- and age-matched healthy controls, and determined methylation levels of AHCY and CBS promoters using quantitative methylation-specific polymerase chain reaction. We used the percentage of methylation reference (PMR) to indicate gene methylation level. RESULTS: We compared the promoter methylation levels of two genes (AHCY and CBS) in peripheral blood DNA between the cerebral infarction case group and the control group. Our study showed no significant difference in AHCY promoter methylation between case and control. Subgroup analysis by gender showed that the methylation level of AHCY in males in the case group was lower than that in the control group, but the difference was not statistically significant in females. In a subgroup analysis by age, there was no significant difference in the AHCY methylation level between the case and control in the young group (≤44 years old). However, the level of AHCY gene methylation in the middle-aged group (45–59 years old) was significantly higher and the aged group (≥60 years old) was significantly lower than that in the control groups. However, CBS promoter methylation levels were significantly lower in the case group than in the control group (median PMR: 70.20% vs 104.10%, P = 3.71E-10). In addition, the CBS methylation levels of males and females in the case group were significantly lower than those in the control group (male: 64.33% vs 105%, P = 2.667E-08; female: 78.05% vs 102.8%, P = 0.003). We also found that the CBS levels in the young (23–44), middle-aged (45–59), and older (60–90) groups were significantly lower than those in the control group (young group: 69.97% vs 114.71%; P = 0.015; middle-aged group: 56.04% vs 91.71%; P = 6.744E-06; older group: 81.6% vs 119.35%; P = 2.644E-04). Our ROC curve analysis of CBS hypomethylation showed an area under the curve of 0.713, a sensitivity of 67.4%, and a specificity of 74.0%. CONCLUSION: Our study suggests that hypomethylation of the CBS promoter may be closely related to the risk of cerebral infarction and may be used as a non-invasive diagnostic biomarker for cerebral infarction. BioMed Central 2020-11-02 /pmc/articles/PMC7607831/ /pubmed/33138824 http://dx.doi.org/10.1186/s12920-020-00798-7 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Li, Xiaodong Bu, Shufang Pan, Ran Ran Zhou, Cong Qu, Kun Ying, Xiuru Zhong, Jie Xiao, Jianhao Yuan, Qian Zhang, Simiao Tipton, Laura Wang, Yunliang Deng, Youping Duan, Shiwei The values of AHCY and CBS promoter methylation on the diagnosis of cerebral infarction in Chinese Han population |
title | The values of AHCY and CBS promoter methylation on the diagnosis of cerebral infarction in Chinese Han population |
title_full | The values of AHCY and CBS promoter methylation on the diagnosis of cerebral infarction in Chinese Han population |
title_fullStr | The values of AHCY and CBS promoter methylation on the diagnosis of cerebral infarction in Chinese Han population |
title_full_unstemmed | The values of AHCY and CBS promoter methylation on the diagnosis of cerebral infarction in Chinese Han population |
title_short | The values of AHCY and CBS promoter methylation on the diagnosis of cerebral infarction in Chinese Han population |
title_sort | values of ahcy and cbs promoter methylation on the diagnosis of cerebral infarction in chinese han population |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7607831/ https://www.ncbi.nlm.nih.gov/pubmed/33138824 http://dx.doi.org/10.1186/s12920-020-00798-7 |
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