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A new deep learning pipeline to detect Covid-19 on chest X-ray images using local binary pattern, dual tree complex wavelet transform and convolutional neural networks

In this study, which aims at early diagnosis of Covid-19 disease using X-ray images, the deep-learning approach, a state-of-the-art artificial intelligence method, was used, and automatic classification of images was performed using convolutional neural networks (CNN). In the first training-test dat...

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Detalles Bibliográficos
Autores principales: Yasar, Huseyin, Ceylan, Murat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7609830/
https://www.ncbi.nlm.nih.gov/pubmed/34764560
http://dx.doi.org/10.1007/s10489-020-02019-1
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author Yasar, Huseyin
Ceylan, Murat
author_facet Yasar, Huseyin
Ceylan, Murat
author_sort Yasar, Huseyin
collection PubMed
description In this study, which aims at early diagnosis of Covid-19 disease using X-ray images, the deep-learning approach, a state-of-the-art artificial intelligence method, was used, and automatic classification of images was performed using convolutional neural networks (CNN). In the first training-test data set used in the study, there were 230 X-ray images, of which 150 were Covid-19 and 80 were non-Covid-19, while in the second training-test data set there were 476 X-ray images, of which 150 were Covid-19 and 326 were non-Covid-19. Thus, classification results have been provided for two data sets, containing predominantly Covid-19 images and predominantly non-Covid-19 images, respectively. In the study, a 23-layer CNN architecture and a 54-layer CNN architecture were developed. Within the scope of the study, the results were obtained using chest X-ray images directly in the training-test procedures and the sub-band images obtained by applying dual tree complex wavelet transform (DT-CWT) to the above-mentioned images. The same experiments were repeated using images obtained by applying local binary pattern (LBP) to the chest X-ray images. Within the scope of the study, four new result generation pipeline algorithms having been put forward additionally, it was ensured that the experimental results were combined and the success of the study was improved. In the experiments carried out in this study, the training sessions were carried out using the k-fold cross validation method. Here the k value was chosen as 23 for the first and second training-test data sets. Considering the average highest results of the experiments performed within the scope of the study, the values of sensitivity, specificity, accuracy, F-1 score, and area under the receiver operating characteristic curve (AUC) for the first training-test data set were 0,9947, 0,9800, 0,9843, 0,9881 and 0,9990 respectively; while for the second training-test data set, they were 0,9920, 0,9939, 0,9891, 0,9828 and 0,9991; respectively. Within the scope of the study, finally, all the images were combined and the training and testing processes were repeated for a total of 556 X-ray images comprising 150 Covid-19 images and 406 non-Covid-19 images, by applying 2-fold cross. In this context, the average highest values of sensitivity, specificity, accuracy, F-1 score, and AUC for this last training-test data set were found to be 0,9760, 1,0000, 0,9906, 0,9823 and 0,9997; respectively.
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spelling pubmed-76098302020-11-05 A new deep learning pipeline to detect Covid-19 on chest X-ray images using local binary pattern, dual tree complex wavelet transform and convolutional neural networks Yasar, Huseyin Ceylan, Murat Appl Intell (Dordr) Article In this study, which aims at early diagnosis of Covid-19 disease using X-ray images, the deep-learning approach, a state-of-the-art artificial intelligence method, was used, and automatic classification of images was performed using convolutional neural networks (CNN). In the first training-test data set used in the study, there were 230 X-ray images, of which 150 were Covid-19 and 80 were non-Covid-19, while in the second training-test data set there were 476 X-ray images, of which 150 were Covid-19 and 326 were non-Covid-19. Thus, classification results have been provided for two data sets, containing predominantly Covid-19 images and predominantly non-Covid-19 images, respectively. In the study, a 23-layer CNN architecture and a 54-layer CNN architecture were developed. Within the scope of the study, the results were obtained using chest X-ray images directly in the training-test procedures and the sub-band images obtained by applying dual tree complex wavelet transform (DT-CWT) to the above-mentioned images. The same experiments were repeated using images obtained by applying local binary pattern (LBP) to the chest X-ray images. Within the scope of the study, four new result generation pipeline algorithms having been put forward additionally, it was ensured that the experimental results were combined and the success of the study was improved. In the experiments carried out in this study, the training sessions were carried out using the k-fold cross validation method. Here the k value was chosen as 23 for the first and second training-test data sets. Considering the average highest results of the experiments performed within the scope of the study, the values of sensitivity, specificity, accuracy, F-1 score, and area under the receiver operating characteristic curve (AUC) for the first training-test data set were 0,9947, 0,9800, 0,9843, 0,9881 and 0,9990 respectively; while for the second training-test data set, they were 0,9920, 0,9939, 0,9891, 0,9828 and 0,9991; respectively. Within the scope of the study, finally, all the images were combined and the training and testing processes were repeated for a total of 556 X-ray images comprising 150 Covid-19 images and 406 non-Covid-19 images, by applying 2-fold cross. In this context, the average highest values of sensitivity, specificity, accuracy, F-1 score, and AUC for this last training-test data set were found to be 0,9760, 1,0000, 0,9906, 0,9823 and 0,9997; respectively. Springer US 2020-11-04 2021 /pmc/articles/PMC7609830/ /pubmed/34764560 http://dx.doi.org/10.1007/s10489-020-02019-1 Text en © Springer Science+Business Media, LLC, part of Springer Nature 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Yasar, Huseyin
Ceylan, Murat
A new deep learning pipeline to detect Covid-19 on chest X-ray images using local binary pattern, dual tree complex wavelet transform and convolutional neural networks
title A new deep learning pipeline to detect Covid-19 on chest X-ray images using local binary pattern, dual tree complex wavelet transform and convolutional neural networks
title_full A new deep learning pipeline to detect Covid-19 on chest X-ray images using local binary pattern, dual tree complex wavelet transform and convolutional neural networks
title_fullStr A new deep learning pipeline to detect Covid-19 on chest X-ray images using local binary pattern, dual tree complex wavelet transform and convolutional neural networks
title_full_unstemmed A new deep learning pipeline to detect Covid-19 on chest X-ray images using local binary pattern, dual tree complex wavelet transform and convolutional neural networks
title_short A new deep learning pipeline to detect Covid-19 on chest X-ray images using local binary pattern, dual tree complex wavelet transform and convolutional neural networks
title_sort new deep learning pipeline to detect covid-19 on chest x-ray images using local binary pattern, dual tree complex wavelet transform and convolutional neural networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7609830/
https://www.ncbi.nlm.nih.gov/pubmed/34764560
http://dx.doi.org/10.1007/s10489-020-02019-1
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