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2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif
Using a combination of X-ray diffraction and simulation techniques, we are able to identify a crystalline monolayer of 1,3,5-triiodotrifluorobenzene formed on graphite. The monolayer is found to exhibit an incommensurate hexagonal unit cell with a lattice parameter of 9.28(7) Å, exhibiting a trigona...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7612049/ https://www.ncbi.nlm.nih.gov/pubmed/34848893 http://dx.doi.org/10.1080/00268976.2021.1900940 |
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author | Davidson, Jonathan A. Jenkins, Stephen J. Gorrec, Fabrice Clarke, Stuart M. |
author_facet | Davidson, Jonathan A. Jenkins, Stephen J. Gorrec, Fabrice Clarke, Stuart M. |
author_sort | Davidson, Jonathan A. |
collection | PubMed |
description | Using a combination of X-ray diffraction and simulation techniques, we are able to identify a crystalline monolayer of 1,3,5-triiodotrifluorobenzene formed on graphite. The monolayer is found to exhibit an incommensurate hexagonal unit cell with a lattice parameter of 9.28(7) Å, exhibiting a trigonal arrangement of iodine atoms not found in the bulk structure. DFT simulations have been performed exhibiting close agreement with the experimental structure. Importantly these simulations can be used to compare the strength of the intermolecular interactions both with and without Van der Waals corrections. Thus it is possible to estimate that halogen bonding consists of approximately half the total interaction energy. This demonstrates that despite the presence of strong directional non-covalent bonding, dispersion interactions account for a very significant proportion of the total energy. [Figure: see text] |
format | Online Article Text |
id | pubmed-7612049 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
record_format | MEDLINE/PubMed |
spelling | pubmed-76120492021-11-29 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif Davidson, Jonathan A. Jenkins, Stephen J. Gorrec, Fabrice Clarke, Stuart M. Mol Phys Article Using a combination of X-ray diffraction and simulation techniques, we are able to identify a crystalline monolayer of 1,3,5-triiodotrifluorobenzene formed on graphite. The monolayer is found to exhibit an incommensurate hexagonal unit cell with a lattice parameter of 9.28(7) Å, exhibiting a trigonal arrangement of iodine atoms not found in the bulk structure. DFT simulations have been performed exhibiting close agreement with the experimental structure. Importantly these simulations can be used to compare the strength of the intermolecular interactions both with and without Van der Waals corrections. Thus it is possible to estimate that halogen bonding consists of approximately half the total interaction energy. This demonstrates that despite the presence of strong directional non-covalent bonding, dispersion interactions account for a very significant proportion of the total energy. [Figure: see text] 2021-03-22 /pmc/articles/PMC7612049/ /pubmed/34848893 http://dx.doi.org/10.1080/00268976.2021.1900940 Text en https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Article Davidson, Jonathan A. Jenkins, Stephen J. Gorrec, Fabrice Clarke, Stuart M. 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif |
title | 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif |
title_full | 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif |
title_fullStr | 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif |
title_full_unstemmed | 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif |
title_short | 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif |
title_sort | 2d constraint modifies packing behaviour: a halobenzene monolayer with x(3) halogen-bonding motif |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7612049/ https://www.ncbi.nlm.nih.gov/pubmed/34848893 http://dx.doi.org/10.1080/00268976.2021.1900940 |
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