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2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif

Using a combination of X-ray diffraction and simulation techniques, we are able to identify a crystalline monolayer of 1,3,5-triiodotrifluorobenzene formed on graphite. The monolayer is found to exhibit an incommensurate hexagonal unit cell with a lattice parameter of 9.28(7) Å, exhibiting a trigona...

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Autores principales: Davidson, Jonathan A., Jenkins, Stephen J., Gorrec, Fabrice, Clarke, Stuart M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7612049/
https://www.ncbi.nlm.nih.gov/pubmed/34848893
http://dx.doi.org/10.1080/00268976.2021.1900940
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author Davidson, Jonathan A.
Jenkins, Stephen J.
Gorrec, Fabrice
Clarke, Stuart M.
author_facet Davidson, Jonathan A.
Jenkins, Stephen J.
Gorrec, Fabrice
Clarke, Stuart M.
author_sort Davidson, Jonathan A.
collection PubMed
description Using a combination of X-ray diffraction and simulation techniques, we are able to identify a crystalline monolayer of 1,3,5-triiodotrifluorobenzene formed on graphite. The monolayer is found to exhibit an incommensurate hexagonal unit cell with a lattice parameter of 9.28(7) Å, exhibiting a trigonal arrangement of iodine atoms not found in the bulk structure. DFT simulations have been performed exhibiting close agreement with the experimental structure. Importantly these simulations can be used to compare the strength of the intermolecular interactions both with and without Van der Waals corrections. Thus it is possible to estimate that halogen bonding consists of approximately half the total interaction energy. This demonstrates that despite the presence of strong directional non-covalent bonding, dispersion interactions account for a very significant proportion of the total energy. [Figure: see text]
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spelling pubmed-76120492021-11-29 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif Davidson, Jonathan A. Jenkins, Stephen J. Gorrec, Fabrice Clarke, Stuart M. Mol Phys Article Using a combination of X-ray diffraction and simulation techniques, we are able to identify a crystalline monolayer of 1,3,5-triiodotrifluorobenzene formed on graphite. The monolayer is found to exhibit an incommensurate hexagonal unit cell with a lattice parameter of 9.28(7) Å, exhibiting a trigonal arrangement of iodine atoms not found in the bulk structure. DFT simulations have been performed exhibiting close agreement with the experimental structure. Importantly these simulations can be used to compare the strength of the intermolecular interactions both with and without Van der Waals corrections. Thus it is possible to estimate that halogen bonding consists of approximately half the total interaction energy. This demonstrates that despite the presence of strong directional non-covalent bonding, dispersion interactions account for a very significant proportion of the total energy. [Figure: see text] 2021-03-22 /pmc/articles/PMC7612049/ /pubmed/34848893 http://dx.doi.org/10.1080/00268976.2021.1900940 Text en https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Article
Davidson, Jonathan A.
Jenkins, Stephen J.
Gorrec, Fabrice
Clarke, Stuart M.
2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif
title 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif
title_full 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif
title_fullStr 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif
title_full_unstemmed 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif
title_short 2D constraint modifies packing behaviour: a halobenzene monolayer with X(3) halogen-bonding motif
title_sort 2d constraint modifies packing behaviour: a halobenzene monolayer with x(3) halogen-bonding motif
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7612049/
https://www.ncbi.nlm.nih.gov/pubmed/34848893
http://dx.doi.org/10.1080/00268976.2021.1900940
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