Cargando…

Assessment of Workflow Feature Selection on Forest LAI Prediction with Sentinel-2A MSI, Landsat 7 ETM+ and Landsat 8 OLI

The European Space Agency (ESA)’s Sentinel-2A (S2A) mission is providing time series that allow the characterisation of dynamic vegetation, especially when combined with the National Aeronautics and Space Administration (NASA)/United States Geological Survey (USGS) Landsat 7 (L7) and Landsat 8 (L8)...

Descripción completa

Detalles Bibliográficos
Autores principales: Brede, Benjamin, Verrelst, Jochem, Gastellu-Etchegorry, Jean-Philippe, Clevers, Jan G. P. W., Goudzwaard, Leo, den Ouden, Jan, Verbesselt, Jan, Herold, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7613362/
https://www.ncbi.nlm.nih.gov/pubmed/36081763
http://dx.doi.org/10.3390/rs12060915
_version_ 1783605471650775040
author Brede, Benjamin
Verrelst, Jochem
Gastellu-Etchegorry, Jean-Philippe
Clevers, Jan G. P. W.
Goudzwaard, Leo
den Ouden, Jan
Verbesselt, Jan
Herold, Martin
author_facet Brede, Benjamin
Verrelst, Jochem
Gastellu-Etchegorry, Jean-Philippe
Clevers, Jan G. P. W.
Goudzwaard, Leo
den Ouden, Jan
Verbesselt, Jan
Herold, Martin
author_sort Brede, Benjamin
collection PubMed
description The European Space Agency (ESA)’s Sentinel-2A (S2A) mission is providing time series that allow the characterisation of dynamic vegetation, especially when combined with the National Aeronautics and Space Administration (NASA)/United States Geological Survey (USGS) Landsat 7 (L7) and Landsat 8 (L8) missions. Hybrid retrieval workflows combining non-parametric Machine Learning Regression Algorithms (MLRAs) and vegetation Radiative Transfer Models (RTMs) were proposed as fast and accurate methods to infer biophysical parameters such as Leaf Area Index (LAI) from these data streams. However, the exact design of optimal retrieval workflows is rarely discussed. In this study, the impact of five retrieval workflow features on LAI prediction performance of MultiSpectral Instrument (MSI), Enhanced Thematic Mapper Plus (ETM+) and Operational Land Imager (OLI) observations was analysed over a Dutch beech forest site for a one-year period. The retrieval workflow features were the (1) addition of prior knowledge of leaf chemistry (two alternatives), (2) the choice of RTM (two alternatives), (3) the addition of Gaussian noise to RTM produced training data (four and five alternatives), (4) possibility of using Sun Zenith Angle (SZA) as an additional MLRA training feature (two alternatives), and (5) the choice of MLRA (six alternatives). The features were varied in a full grid resulting in 960 inversion models in order to find the overall impact on performance as well as possible interactions among the features. A combination of a Terrestrial Laser Scanning (TLS) time series with litter-trap derived LAI served as independent validation. The addition of absolute noise had the most significant impact on prediction performance. It improved the median prediction Root Mean Square Error (RMSE) by 1.08 m(2) m(−2) when 5 % noise was added compared to inversions with 0 % absolute noise. The choice of the MLRA was second most important in terms of median prediction performance, which differed by 0.52 m(2) m(−2) between the best and worst model. The best inversion model achieved an RMSE of 0.91 m(2) m(−2) and explained 84.9% of the variance of the reference time series. The results underline the need to explicitly describe the used noise model in future studies. Similar studies should be conducted in other study areas, both forest and crop systems, in order to test the noise model as an integral part of hybrid retrieval workflows.
format Online
Article
Text
id pubmed-7613362
institution National Center for Biotechnology Information
language English
publishDate 2020
record_format MEDLINE/PubMed
spelling pubmed-76133622022-09-07 Assessment of Workflow Feature Selection on Forest LAI Prediction with Sentinel-2A MSI, Landsat 7 ETM+ and Landsat 8 OLI Brede, Benjamin Verrelst, Jochem Gastellu-Etchegorry, Jean-Philippe Clevers, Jan G. P. W. Goudzwaard, Leo den Ouden, Jan Verbesselt, Jan Herold, Martin Remote Sens (Basel) Article The European Space Agency (ESA)’s Sentinel-2A (S2A) mission is providing time series that allow the characterisation of dynamic vegetation, especially when combined with the National Aeronautics and Space Administration (NASA)/United States Geological Survey (USGS) Landsat 7 (L7) and Landsat 8 (L8) missions. Hybrid retrieval workflows combining non-parametric Machine Learning Regression Algorithms (MLRAs) and vegetation Radiative Transfer Models (RTMs) were proposed as fast and accurate methods to infer biophysical parameters such as Leaf Area Index (LAI) from these data streams. However, the exact design of optimal retrieval workflows is rarely discussed. In this study, the impact of five retrieval workflow features on LAI prediction performance of MultiSpectral Instrument (MSI), Enhanced Thematic Mapper Plus (ETM+) and Operational Land Imager (OLI) observations was analysed over a Dutch beech forest site for a one-year period. The retrieval workflow features were the (1) addition of prior knowledge of leaf chemistry (two alternatives), (2) the choice of RTM (two alternatives), (3) the addition of Gaussian noise to RTM produced training data (four and five alternatives), (4) possibility of using Sun Zenith Angle (SZA) as an additional MLRA training feature (two alternatives), and (5) the choice of MLRA (six alternatives). The features were varied in a full grid resulting in 960 inversion models in order to find the overall impact on performance as well as possible interactions among the features. A combination of a Terrestrial Laser Scanning (TLS) time series with litter-trap derived LAI served as independent validation. The addition of absolute noise had the most significant impact on prediction performance. It improved the median prediction Root Mean Square Error (RMSE) by 1.08 m(2) m(−2) when 5 % noise was added compared to inversions with 0 % absolute noise. The choice of the MLRA was second most important in terms of median prediction performance, which differed by 0.52 m(2) m(−2) between the best and worst model. The best inversion model achieved an RMSE of 0.91 m(2) m(−2) and explained 84.9% of the variance of the reference time series. The results underline the need to explicitly describe the used noise model in future studies. Similar studies should be conducted in other study areas, both forest and crop systems, in order to test the noise model as an integral part of hybrid retrieval workflows. 2020-03-12 /pmc/articles/PMC7613362/ /pubmed/36081763 http://dx.doi.org/10.3390/rs12060915 Text en https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Brede, Benjamin
Verrelst, Jochem
Gastellu-Etchegorry, Jean-Philippe
Clevers, Jan G. P. W.
Goudzwaard, Leo
den Ouden, Jan
Verbesselt, Jan
Herold, Martin
Assessment of Workflow Feature Selection on Forest LAI Prediction with Sentinel-2A MSI, Landsat 7 ETM+ and Landsat 8 OLI
title Assessment of Workflow Feature Selection on Forest LAI Prediction with Sentinel-2A MSI, Landsat 7 ETM+ and Landsat 8 OLI
title_full Assessment of Workflow Feature Selection on Forest LAI Prediction with Sentinel-2A MSI, Landsat 7 ETM+ and Landsat 8 OLI
title_fullStr Assessment of Workflow Feature Selection on Forest LAI Prediction with Sentinel-2A MSI, Landsat 7 ETM+ and Landsat 8 OLI
title_full_unstemmed Assessment of Workflow Feature Selection on Forest LAI Prediction with Sentinel-2A MSI, Landsat 7 ETM+ and Landsat 8 OLI
title_short Assessment of Workflow Feature Selection on Forest LAI Prediction with Sentinel-2A MSI, Landsat 7 ETM+ and Landsat 8 OLI
title_sort assessment of workflow feature selection on forest lai prediction with sentinel-2a msi, landsat 7 etm+ and landsat 8 oli
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7613362/
https://www.ncbi.nlm.nih.gov/pubmed/36081763
http://dx.doi.org/10.3390/rs12060915
work_keys_str_mv AT bredebenjamin assessmentofworkflowfeatureselectiononforestlaipredictionwithsentinel2amsilandsat7etmandlandsat8oli
AT verrelstjochem assessmentofworkflowfeatureselectiononforestlaipredictionwithsentinel2amsilandsat7etmandlandsat8oli
AT gastelluetchegorryjeanphilippe assessmentofworkflowfeatureselectiononforestlaipredictionwithsentinel2amsilandsat7etmandlandsat8oli
AT cleversjangpw assessmentofworkflowfeatureselectiononforestlaipredictionwithsentinel2amsilandsat7etmandlandsat8oli
AT goudzwaardleo assessmentofworkflowfeatureselectiononforestlaipredictionwithsentinel2amsilandsat7etmandlandsat8oli
AT denoudenjan assessmentofworkflowfeatureselectiononforestlaipredictionwithsentinel2amsilandsat7etmandlandsat8oli
AT verbesseltjan assessmentofworkflowfeatureselectiononforestlaipredictionwithsentinel2amsilandsat7etmandlandsat8oli
AT heroldmartin assessmentofworkflowfeatureselectiononforestlaipredictionwithsentinel2amsilandsat7etmandlandsat8oli