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Green LAI Mapping and Cloud Gap-Filling Using Gaussian Process Regression in Google Earth Engine

For the last decade, Gaussian process regression (GPR) proved to be a competitive machine learning regression algorithm for Earth observation applications, with attractive unique properties such as band relevance ranking and uncertainty estimates. More recently, GPR also proved to be a proficient ti...

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Autores principales: Pipia, Luca, Amin, Eatidal, Belda, Santiago, Salinero-Delgado, Matías, Verrelst, Jochem
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7613383/
https://www.ncbi.nlm.nih.gov/pubmed/36082106
http://dx.doi.org/10.3390/rs13030403
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author Pipia, Luca
Amin, Eatidal
Belda, Santiago
Salinero-Delgado, Matías
Verrelst, Jochem
author_facet Pipia, Luca
Amin, Eatidal
Belda, Santiago
Salinero-Delgado, Matías
Verrelst, Jochem
author_sort Pipia, Luca
collection PubMed
description For the last decade, Gaussian process regression (GPR) proved to be a competitive machine learning regression algorithm for Earth observation applications, with attractive unique properties such as band relevance ranking and uncertainty estimates. More recently, GPR also proved to be a proficient time series processor to fill up gaps in optical imagery, typically due to cloud cover. This makes GPR perfectly suited for large-scale spatiotemporal processing of satellite imageries into cloud-free products of biophysical variables. With the advent of the Google Earth Engine (GEE) cloud platform, new opportunities emerged to process local-to-planetary scale satellite data using advanced machine learning techniques and convert them into gap-filled vegetation properties products. However, GPR is not yet part of the GEE ecosystem. To circumvent this limitation, this work proposes a general adaptation of GPR formulation to parallel processing framework and its integration into GEE. To demonstrate the functioning and utility of the developed workflow, a GPR model predicting green leaf area index (LAI(G)) from Sentinel-2 imagery was imported. Although by running this GPR model into GEE any corner of the world can be mapped into LAI(G) at a resolution of 20 m, here we show some demonstration cases over western Europe with zoom-ins over Spain. Thanks to the computational power of GEE, the mapping takes place on-the-fly. Additionally, a GPR-based gap filling strategy based on pre-optimized kernel hyperparameters is also put forward for the generation of multi-orbit cloud-free LAI(G) maps with an unprecedented level of detail, and the extraction of regularly-sampled LAI(G) time series at a pixel level. The ability to plugin a locally-trained GPR model into the GEE framework and its instant processing opens up a new paradigm of remote sensing image processing.
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spelling pubmed-76133832022-09-07 Green LAI Mapping and Cloud Gap-Filling Using Gaussian Process Regression in Google Earth Engine Pipia, Luca Amin, Eatidal Belda, Santiago Salinero-Delgado, Matías Verrelst, Jochem Remote Sens (Basel) Article For the last decade, Gaussian process regression (GPR) proved to be a competitive machine learning regression algorithm for Earth observation applications, with attractive unique properties such as band relevance ranking and uncertainty estimates. More recently, GPR also proved to be a proficient time series processor to fill up gaps in optical imagery, typically due to cloud cover. This makes GPR perfectly suited for large-scale spatiotemporal processing of satellite imageries into cloud-free products of biophysical variables. With the advent of the Google Earth Engine (GEE) cloud platform, new opportunities emerged to process local-to-planetary scale satellite data using advanced machine learning techniques and convert them into gap-filled vegetation properties products. However, GPR is not yet part of the GEE ecosystem. To circumvent this limitation, this work proposes a general adaptation of GPR formulation to parallel processing framework and its integration into GEE. To demonstrate the functioning and utility of the developed workflow, a GPR model predicting green leaf area index (LAI(G)) from Sentinel-2 imagery was imported. Although by running this GPR model into GEE any corner of the world can be mapped into LAI(G) at a resolution of 20 m, here we show some demonstration cases over western Europe with zoom-ins over Spain. Thanks to the computational power of GEE, the mapping takes place on-the-fly. Additionally, a GPR-based gap filling strategy based on pre-optimized kernel hyperparameters is also put forward for the generation of multi-orbit cloud-free LAI(G) maps with an unprecedented level of detail, and the extraction of regularly-sampled LAI(G) time series at a pixel level. The ability to plugin a locally-trained GPR model into the GEE framework and its instant processing opens up a new paradigm of remote sensing image processing. 2021-01-24 /pmc/articles/PMC7613383/ /pubmed/36082106 http://dx.doi.org/10.3390/rs13030403 Text en https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license https://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Pipia, Luca
Amin, Eatidal
Belda, Santiago
Salinero-Delgado, Matías
Verrelst, Jochem
Green LAI Mapping and Cloud Gap-Filling Using Gaussian Process Regression in Google Earth Engine
title Green LAI Mapping and Cloud Gap-Filling Using Gaussian Process Regression in Google Earth Engine
title_full Green LAI Mapping and Cloud Gap-Filling Using Gaussian Process Regression in Google Earth Engine
title_fullStr Green LAI Mapping and Cloud Gap-Filling Using Gaussian Process Regression in Google Earth Engine
title_full_unstemmed Green LAI Mapping and Cloud Gap-Filling Using Gaussian Process Regression in Google Earth Engine
title_short Green LAI Mapping and Cloud Gap-Filling Using Gaussian Process Regression in Google Earth Engine
title_sort green lai mapping and cloud gap-filling using gaussian process regression in google earth engine
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7613383/
https://www.ncbi.nlm.nih.gov/pubmed/36082106
http://dx.doi.org/10.3390/rs13030403
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