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In simulated data and health records, latent class analysis was the optimum multimorbidity clustering algorithm

BACKGROUND AND OBJECTIVES: To investigate the reproducibility and validity of latent class analysis (LCA) and hierarchical cluster analysis (HCA), multiple correspondence analysis followed by k-means (MCA-kmeans) and k-means (kmeans) for multimorbidity clustering. METHODS: We first investigated clus...

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Autores principales: Nichols, Linda, Taverner, Tom, Crowe, Francesca, Richardson, Sylvia, Yau, Christopher, Kiddle, Steven, Kirk, Paul, Barrett, Jessica, Nirantharakumar, Krishnarajah, Griffin, Simon, Edwards, Duncan, Marshall, Tom
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7613854/
https://www.ncbi.nlm.nih.gov/pubmed/36228971
http://dx.doi.org/10.1016/j.jclinepi.2022.10.011
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author Nichols, Linda
Taverner, Tom
Crowe, Francesca
Richardson, Sylvia
Yau, Christopher
Kiddle, Steven
Kirk, Paul
Barrett, Jessica
Nirantharakumar, Krishnarajah
Griffin, Simon
Edwards, Duncan
Marshall, Tom
author_facet Nichols, Linda
Taverner, Tom
Crowe, Francesca
Richardson, Sylvia
Yau, Christopher
Kiddle, Steven
Kirk, Paul
Barrett, Jessica
Nirantharakumar, Krishnarajah
Griffin, Simon
Edwards, Duncan
Marshall, Tom
author_sort Nichols, Linda
collection PubMed
description BACKGROUND AND OBJECTIVES: To investigate the reproducibility and validity of latent class analysis (LCA) and hierarchical cluster analysis (HCA), multiple correspondence analysis followed by k-means (MCA-kmeans) and k-means (kmeans) for multimorbidity clustering. METHODS: We first investigated clustering algorithms in simulated datasets with 26 diseases of varying prevalence in predetermined clusters, comparing the derived clusters to known clusters using the adjusted Rand Index (aRI). We then them investigated in the medical records of male patients, aged 65 to 84 years from 50 UK general practices, with 49 long-term health conditions. We compared within cluster morbidity profiles using the Pearson correlation coefficient and assessed cluster stability was in 400 bootstrap samples. RESULTS: In the simulated datasets, the closest agreement (largest aRI) to known clusters was with LCA and then MCA-kmeans algorithms. In the medical records dataset, all four algorithms identified one cluster of 20–25% of the dataset with about 82% of the same patients across all four algorithms. LCA and MCA-kmeans both found a second cluster of 7% of the dataset. Other clusters were found by only one algorithm. LCA and MCA-kmeans clustering gave the most similar partitioning (aRI 0.54). CONCLUSION: LCA achieved higher aRI than other clustering algorithms.
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spelling pubmed-76138542022-11-27 In simulated data and health records, latent class analysis was the optimum multimorbidity clustering algorithm Nichols, Linda Taverner, Tom Crowe, Francesca Richardson, Sylvia Yau, Christopher Kiddle, Steven Kirk, Paul Barrett, Jessica Nirantharakumar, Krishnarajah Griffin, Simon Edwards, Duncan Marshall, Tom J Clin Epidemiol Article BACKGROUND AND OBJECTIVES: To investigate the reproducibility and validity of latent class analysis (LCA) and hierarchical cluster analysis (HCA), multiple correspondence analysis followed by k-means (MCA-kmeans) and k-means (kmeans) for multimorbidity clustering. METHODS: We first investigated clustering algorithms in simulated datasets with 26 diseases of varying prevalence in predetermined clusters, comparing the derived clusters to known clusters using the adjusted Rand Index (aRI). We then them investigated in the medical records of male patients, aged 65 to 84 years from 50 UK general practices, with 49 long-term health conditions. We compared within cluster morbidity profiles using the Pearson correlation coefficient and assessed cluster stability was in 400 bootstrap samples. RESULTS: In the simulated datasets, the closest agreement (largest aRI) to known clusters was with LCA and then MCA-kmeans algorithms. In the medical records dataset, all four algorithms identified one cluster of 20–25% of the dataset with about 82% of the same patients across all four algorithms. LCA and MCA-kmeans both found a second cluster of 7% of the dataset. Other clusters were found by only one algorithm. LCA and MCA-kmeans clustering gave the most similar partitioning (aRI 0.54). CONCLUSION: LCA achieved higher aRI than other clustering algorithms. 2022-10-11 2022-10-11 /pmc/articles/PMC7613854/ /pubmed/36228971 http://dx.doi.org/10.1016/j.jclinepi.2022.10.011 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/) International license.
spellingShingle Article
Nichols, Linda
Taverner, Tom
Crowe, Francesca
Richardson, Sylvia
Yau, Christopher
Kiddle, Steven
Kirk, Paul
Barrett, Jessica
Nirantharakumar, Krishnarajah
Griffin, Simon
Edwards, Duncan
Marshall, Tom
In simulated data and health records, latent class analysis was the optimum multimorbidity clustering algorithm
title In simulated data and health records, latent class analysis was the optimum multimorbidity clustering algorithm
title_full In simulated data and health records, latent class analysis was the optimum multimorbidity clustering algorithm
title_fullStr In simulated data and health records, latent class analysis was the optimum multimorbidity clustering algorithm
title_full_unstemmed In simulated data and health records, latent class analysis was the optimum multimorbidity clustering algorithm
title_short In simulated data and health records, latent class analysis was the optimum multimorbidity clustering algorithm
title_sort in simulated data and health records, latent class analysis was the optimum multimorbidity clustering algorithm
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7613854/
https://www.ncbi.nlm.nih.gov/pubmed/36228971
http://dx.doi.org/10.1016/j.jclinepi.2022.10.011
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