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Resolving bundle-specific intra-axonal T(2) values within a voxel using diffusion-relaxation tract-based estimation
At the typical spatial resolution of MRI in the human brain, approximately 60–90% of voxels contain multiple fiber populations. Quantifying microstructural properties of distinct fiber populations within a voxel is therefore challenging but necessary. While progress has been made for diffusion and T...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7615251/ https://www.ncbi.nlm.nih.gov/pubmed/33301934 http://dx.doi.org/10.1016/j.neuroimage.2020.117617 |
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author | Barakovic, Muhamed Tax, Chantal M.W. Rudrapatna, Umesh Chamberland, Maxime Rafael-Patino, Jonathan Granziera, Cristina Thiran, Jean-Philippe Daducci, Alessandro Canales-Rodríguez, Erick J. Jones, Derek K. |
author_facet | Barakovic, Muhamed Tax, Chantal M.W. Rudrapatna, Umesh Chamberland, Maxime Rafael-Patino, Jonathan Granziera, Cristina Thiran, Jean-Philippe Daducci, Alessandro Canales-Rodríguez, Erick J. Jones, Derek K. |
author_sort | Barakovic, Muhamed |
collection | PubMed |
description | At the typical spatial resolution of MRI in the human brain, approximately 60–90% of voxels contain multiple fiber populations. Quantifying microstructural properties of distinct fiber populations within a voxel is therefore challenging but necessary. While progress has been made for diffusion and T(1)-relaxation properties, how to resolve intra-voxel T(2) heterogeneity remains an open question. Here a novel framework, named COMMIT-T(2), is proposed that uses tractography-based spatial regularization with diffusion-relaxometry data to estimate multiple intra-axonal T(2) values within a voxel. Unlike previously-proposed voxel-based T(2) estimation methods, which (when applied in white matter) implicitly assume just one fiber bundle in the voxel or the same T(2) for all bundles in the voxel, COMMIT-T(2) can recover specific T(2) values for each unique fiber population passing through the voxel. In this approach, the number of recovered unique T(2) values is not determined by a number of model parameters set a priori, but rather by the number of tractography-reconstructed streamlines passing through the voxel. Proof-of-concept is provided in silico and in vivo, including a demonstration that distinct tract-specific T(2) profiles can be recovered even in the three-way crossing of the corpus callosum, arcuate fasciculus, and corticospinal tract. We demonstrate the favourable performance of COMMIT-T(2) compared to that of voxelwise approaches for mapping intra-axonal T(2) exploiting diffusion, including a direction-averaged method and AMICO-T(2), a new extension to the previously-proposed Accelerated Microstructure Imaging via Convex Optimization (AMICO) framework. |
format | Online Article Text |
id | pubmed-7615251 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
record_format | MEDLINE/PubMed |
spelling | pubmed-76152512023-10-27 Resolving bundle-specific intra-axonal T(2) values within a voxel using diffusion-relaxation tract-based estimation Barakovic, Muhamed Tax, Chantal M.W. Rudrapatna, Umesh Chamberland, Maxime Rafael-Patino, Jonathan Granziera, Cristina Thiran, Jean-Philippe Daducci, Alessandro Canales-Rodríguez, Erick J. Jones, Derek K. Neuroimage Article At the typical spatial resolution of MRI in the human brain, approximately 60–90% of voxels contain multiple fiber populations. Quantifying microstructural properties of distinct fiber populations within a voxel is therefore challenging but necessary. While progress has been made for diffusion and T(1)-relaxation properties, how to resolve intra-voxel T(2) heterogeneity remains an open question. Here a novel framework, named COMMIT-T(2), is proposed that uses tractography-based spatial regularization with diffusion-relaxometry data to estimate multiple intra-axonal T(2) values within a voxel. Unlike previously-proposed voxel-based T(2) estimation methods, which (when applied in white matter) implicitly assume just one fiber bundle in the voxel or the same T(2) for all bundles in the voxel, COMMIT-T(2) can recover specific T(2) values for each unique fiber population passing through the voxel. In this approach, the number of recovered unique T(2) values is not determined by a number of model parameters set a priori, but rather by the number of tractography-reconstructed streamlines passing through the voxel. Proof-of-concept is provided in silico and in vivo, including a demonstration that distinct tract-specific T(2) profiles can be recovered even in the three-way crossing of the corpus callosum, arcuate fasciculus, and corticospinal tract. We demonstrate the favourable performance of COMMIT-T(2) compared to that of voxelwise approaches for mapping intra-axonal T(2) exploiting diffusion, including a direction-averaged method and AMICO-T(2), a new extension to the previously-proposed Accelerated Microstructure Imaging via Convex Optimization (AMICO) framework. 2021-02-15 2020-12-07 /pmc/articles/PMC7615251/ /pubmed/33301934 http://dx.doi.org/10.1016/j.neuroimage.2020.117617 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) ). |
spellingShingle | Article Barakovic, Muhamed Tax, Chantal M.W. Rudrapatna, Umesh Chamberland, Maxime Rafael-Patino, Jonathan Granziera, Cristina Thiran, Jean-Philippe Daducci, Alessandro Canales-Rodríguez, Erick J. Jones, Derek K. Resolving bundle-specific intra-axonal T(2) values within a voxel using diffusion-relaxation tract-based estimation |
title | Resolving bundle-specific intra-axonal T(2) values within a voxel using diffusion-relaxation tract-based estimation |
title_full | Resolving bundle-specific intra-axonal T(2) values within a voxel using diffusion-relaxation tract-based estimation |
title_fullStr | Resolving bundle-specific intra-axonal T(2) values within a voxel using diffusion-relaxation tract-based estimation |
title_full_unstemmed | Resolving bundle-specific intra-axonal T(2) values within a voxel using diffusion-relaxation tract-based estimation |
title_short | Resolving bundle-specific intra-axonal T(2) values within a voxel using diffusion-relaxation tract-based estimation |
title_sort | resolving bundle-specific intra-axonal t(2) values within a voxel using diffusion-relaxation tract-based estimation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7615251/ https://www.ncbi.nlm.nih.gov/pubmed/33301934 http://dx.doi.org/10.1016/j.neuroimage.2020.117617 |
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