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MYC as a driver of stochastic chromatin networks: implications for the fitness of cancer cells

The relationship between stochastic transcriptional bursts and dynamic 3D chromatin states is not well understood. Using an innovated, ultra-sensitive technique, we address here enigmatic features underlying the communications between MYC and its enhancers in relation to the transcriptional process....

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Autores principales: Sumida, Noriyuki, Sifakis, Emmanouil G, Kiani, Narsis A, Ronnegren, Anna Lewandowska, Scholz, Barbara A, Vestlund, Johanna, Gomez-Cabrero, David, Tegner, Jesper, Göndör, Anita, Ohlsson, Rolf
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7641766/
https://www.ncbi.nlm.nih.gov/pubmed/33051686
http://dx.doi.org/10.1093/nar/gkaa817
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author Sumida, Noriyuki
Sifakis, Emmanouil G
Kiani, Narsis A
Ronnegren, Anna Lewandowska
Scholz, Barbara A
Vestlund, Johanna
Gomez-Cabrero, David
Tegner, Jesper
Göndör, Anita
Ohlsson, Rolf
author_facet Sumida, Noriyuki
Sifakis, Emmanouil G
Kiani, Narsis A
Ronnegren, Anna Lewandowska
Scholz, Barbara A
Vestlund, Johanna
Gomez-Cabrero, David
Tegner, Jesper
Göndör, Anita
Ohlsson, Rolf
author_sort Sumida, Noriyuki
collection PubMed
description The relationship between stochastic transcriptional bursts and dynamic 3D chromatin states is not well understood. Using an innovated, ultra-sensitive technique, we address here enigmatic features underlying the communications between MYC and its enhancers in relation to the transcriptional process. MYC thus interacts with its flanking enhancers in a mutually exclusive manner documenting that enhancer hubs impinging on MYC detected in large cell populations likely do not exist in single cells. Dynamic encounters with pathologically activated enhancers responsive to a range of environmental cues, involved <10% of active MYC alleles at any given time in colon cancer cells. Being the most central node of the chromatin network, MYC itself likely drives its communications with flanking enhancers, rather than vice versa. We submit that these features underlie an acquired ability of MYC to become dynamically activated in response to a diverse range of environmental cues encountered by the cell during the neoplastic process.
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spelling pubmed-76417662020-11-10 MYC as a driver of stochastic chromatin networks: implications for the fitness of cancer cells Sumida, Noriyuki Sifakis, Emmanouil G Kiani, Narsis A Ronnegren, Anna Lewandowska Scholz, Barbara A Vestlund, Johanna Gomez-Cabrero, David Tegner, Jesper Göndör, Anita Ohlsson, Rolf Nucleic Acids Res Gene regulation, Chromatin and Epigenetics The relationship between stochastic transcriptional bursts and dynamic 3D chromatin states is not well understood. Using an innovated, ultra-sensitive technique, we address here enigmatic features underlying the communications between MYC and its enhancers in relation to the transcriptional process. MYC thus interacts with its flanking enhancers in a mutually exclusive manner documenting that enhancer hubs impinging on MYC detected in large cell populations likely do not exist in single cells. Dynamic encounters with pathologically activated enhancers responsive to a range of environmental cues, involved <10% of active MYC alleles at any given time in colon cancer cells. Being the most central node of the chromatin network, MYC itself likely drives its communications with flanking enhancers, rather than vice versa. We submit that these features underlie an acquired ability of MYC to become dynamically activated in response to a diverse range of environmental cues encountered by the cell during the neoplastic process. Oxford University Press 2020-10-13 /pmc/articles/PMC7641766/ /pubmed/33051686 http://dx.doi.org/10.1093/nar/gkaa817 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Gene regulation, Chromatin and Epigenetics
Sumida, Noriyuki
Sifakis, Emmanouil G
Kiani, Narsis A
Ronnegren, Anna Lewandowska
Scholz, Barbara A
Vestlund, Johanna
Gomez-Cabrero, David
Tegner, Jesper
Göndör, Anita
Ohlsson, Rolf
MYC as a driver of stochastic chromatin networks: implications for the fitness of cancer cells
title MYC as a driver of stochastic chromatin networks: implications for the fitness of cancer cells
title_full MYC as a driver of stochastic chromatin networks: implications for the fitness of cancer cells
title_fullStr MYC as a driver of stochastic chromatin networks: implications for the fitness of cancer cells
title_full_unstemmed MYC as a driver of stochastic chromatin networks: implications for the fitness of cancer cells
title_short MYC as a driver of stochastic chromatin networks: implications for the fitness of cancer cells
title_sort myc as a driver of stochastic chromatin networks: implications for the fitness of cancer cells
topic Gene regulation, Chromatin and Epigenetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7641766/
https://www.ncbi.nlm.nih.gov/pubmed/33051686
http://dx.doi.org/10.1093/nar/gkaa817
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