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Can pre-trained convolutional neural networks be directly used as a feature extractor for video-based neonatal sleep and wake classification?

OBJECTIVE: In this paper, we propose to evaluate the use of pre-trained convolutional neural networks (CNNs) as a features extractor followed by the Principal Component Analysis (PCA) to find the best discriminant features to perform classification using support vector machine (SVM) algorithm for ne...

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Autores principales: Awais, Muhammad, Long, Xi, Yin, Bin, Chen, Chen, Akbarzadeh, Saeed, Abbasi, Saadullah Farooq, Irfan, Muhammad, Lu, Chunmei, Wang, Xinhua, Wang, Laishuan, Chen, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7641846/
https://www.ncbi.nlm.nih.gov/pubmed/33148327
http://dx.doi.org/10.1186/s13104-020-05343-4
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author Awais, Muhammad
Long, Xi
Yin, Bin
Chen, Chen
Akbarzadeh, Saeed
Abbasi, Saadullah Farooq
Irfan, Muhammad
Lu, Chunmei
Wang, Xinhua
Wang, Laishuan
Chen, Wei
author_facet Awais, Muhammad
Long, Xi
Yin, Bin
Chen, Chen
Akbarzadeh, Saeed
Abbasi, Saadullah Farooq
Irfan, Muhammad
Lu, Chunmei
Wang, Xinhua
Wang, Laishuan
Chen, Wei
author_sort Awais, Muhammad
collection PubMed
description OBJECTIVE: In this paper, we propose to evaluate the use of pre-trained convolutional neural networks (CNNs) as a features extractor followed by the Principal Component Analysis (PCA) to find the best discriminant features to perform classification using support vector machine (SVM) algorithm for neonatal sleep and wake states using Fluke(®) facial video frames. Using pre-trained CNNs as a feature extractor would hugely reduce the effort of collecting new neonatal data for training a neural network which could be computationally expensive. The features are extracted after fully connected layers (FCL’s), where we compare several pre-trained CNNs, e.g., VGG16, VGG19, InceptionV3, GoogLeNet, ResNet, and AlexNet. RESULTS: From around 2-h Fluke(®) video recording of seven neonates, we achieved a modest classification performance with an accuracy, sensitivity, and specificity of 65.3%, 69.8%, 61.0%, respectively with AlexNet using Fluke(®) (RGB) video frames. This indicates that using a pre-trained model as a feature extractor could not fully suffice for highly reliable sleep and wake classification in neonates. Therefore, in future work a dedicated neural network trained on neonatal data or a transfer learning approach is required.
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spelling pubmed-76418462020-11-05 Can pre-trained convolutional neural networks be directly used as a feature extractor for video-based neonatal sleep and wake classification? Awais, Muhammad Long, Xi Yin, Bin Chen, Chen Akbarzadeh, Saeed Abbasi, Saadullah Farooq Irfan, Muhammad Lu, Chunmei Wang, Xinhua Wang, Laishuan Chen, Wei BMC Res Notes Research Note OBJECTIVE: In this paper, we propose to evaluate the use of pre-trained convolutional neural networks (CNNs) as a features extractor followed by the Principal Component Analysis (PCA) to find the best discriminant features to perform classification using support vector machine (SVM) algorithm for neonatal sleep and wake states using Fluke(®) facial video frames. Using pre-trained CNNs as a feature extractor would hugely reduce the effort of collecting new neonatal data for training a neural network which could be computationally expensive. The features are extracted after fully connected layers (FCL’s), where we compare several pre-trained CNNs, e.g., VGG16, VGG19, InceptionV3, GoogLeNet, ResNet, and AlexNet. RESULTS: From around 2-h Fluke(®) video recording of seven neonates, we achieved a modest classification performance with an accuracy, sensitivity, and specificity of 65.3%, 69.8%, 61.0%, respectively with AlexNet using Fluke(®) (RGB) video frames. This indicates that using a pre-trained model as a feature extractor could not fully suffice for highly reliable sleep and wake classification in neonates. Therefore, in future work a dedicated neural network trained on neonatal data or a transfer learning approach is required. BioMed Central 2020-11-04 /pmc/articles/PMC7641846/ /pubmed/33148327 http://dx.doi.org/10.1186/s13104-020-05343-4 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Note
Awais, Muhammad
Long, Xi
Yin, Bin
Chen, Chen
Akbarzadeh, Saeed
Abbasi, Saadullah Farooq
Irfan, Muhammad
Lu, Chunmei
Wang, Xinhua
Wang, Laishuan
Chen, Wei
Can pre-trained convolutional neural networks be directly used as a feature extractor for video-based neonatal sleep and wake classification?
title Can pre-trained convolutional neural networks be directly used as a feature extractor for video-based neonatal sleep and wake classification?
title_full Can pre-trained convolutional neural networks be directly used as a feature extractor for video-based neonatal sleep and wake classification?
title_fullStr Can pre-trained convolutional neural networks be directly used as a feature extractor for video-based neonatal sleep and wake classification?
title_full_unstemmed Can pre-trained convolutional neural networks be directly used as a feature extractor for video-based neonatal sleep and wake classification?
title_short Can pre-trained convolutional neural networks be directly used as a feature extractor for video-based neonatal sleep and wake classification?
title_sort can pre-trained convolutional neural networks be directly used as a feature extractor for video-based neonatal sleep and wake classification?
topic Research Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7641846/
https://www.ncbi.nlm.nih.gov/pubmed/33148327
http://dx.doi.org/10.1186/s13104-020-05343-4
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