Cargando…

Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center

With the recent developments in the field of free-electron-laser-based serial femtosecond crystallography, the necessity to obtain a large number of high-quality crystals has emerged. In this work crystallization techniques were selected, tested and optimized for the lipid mesophase crystallization...

Descripción completa

Detalles Bibliográficos
Autores principales: Selikhanov, Georgii, Fufina, Tatiana, Vasilieva, Lyudmila, Betzel, Christian, Gabdulkhakov, Azat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7642779/
https://www.ncbi.nlm.nih.gov/pubmed/33209319
http://dx.doi.org/10.1107/S2052252520012142
_version_ 1783606150219956224
author Selikhanov, Georgii
Fufina, Tatiana
Vasilieva, Lyudmila
Betzel, Christian
Gabdulkhakov, Azat
author_facet Selikhanov, Georgii
Fufina, Tatiana
Vasilieva, Lyudmila
Betzel, Christian
Gabdulkhakov, Azat
author_sort Selikhanov, Georgii
collection PubMed
description With the recent developments in the field of free-electron-laser-based serial femtosecond crystallography, the necessity to obtain a large number of high-quality crystals has emerged. In this work crystallization techniques were selected, tested and optimized for the lipid mesophase crystallization of the Rhodobacter sphaeroides membrane pigment-protein complex, known as the photosynthetic reaction center (RC). Novel approaches for lipid sponge phase crystallization in comparatively large volumes using Hamilton gas-tight glass syringes and plastic pipetting tips are described. An analysis of RC crystal structures obtained by lipid mesophase crystallization revealed non-native ligands that displaced the native electron-transfer cofactors (carotenoid sphero­idene and a ubi­quinone molecule) from their binding pockets. These ligands were identified and were found to be lipids that are major mesophase components. The selection of distinct co-crystallization conditions with the missing cofactors facilitated the restoration of sphero­idene in its binding site.
format Online
Article
Text
id pubmed-7642779
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-76427792020-11-17 Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center Selikhanov, Georgii Fufina, Tatiana Vasilieva, Lyudmila Betzel, Christian Gabdulkhakov, Azat IUCrJ Research Papers With the recent developments in the field of free-electron-laser-based serial femtosecond crystallography, the necessity to obtain a large number of high-quality crystals has emerged. In this work crystallization techniques were selected, tested and optimized for the lipid mesophase crystallization of the Rhodobacter sphaeroides membrane pigment-protein complex, known as the photosynthetic reaction center (RC). Novel approaches for lipid sponge phase crystallization in comparatively large volumes using Hamilton gas-tight glass syringes and plastic pipetting tips are described. An analysis of RC crystal structures obtained by lipid mesophase crystallization revealed non-native ligands that displaced the native electron-transfer cofactors (carotenoid sphero­idene and a ubi­quinone molecule) from their binding pockets. These ligands were identified and were found to be lipids that are major mesophase components. The selection of distinct co-crystallization conditions with the missing cofactors facilitated the restoration of sphero­idene in its binding site. International Union of Crystallography 2020-10-03 /pmc/articles/PMC7642779/ /pubmed/33209319 http://dx.doi.org/10.1107/S2052252520012142 Text en © Selikhanov et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Papers
Selikhanov, Georgii
Fufina, Tatiana
Vasilieva, Lyudmila
Betzel, Christian
Gabdulkhakov, Azat
Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center
title Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center
title_full Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center
title_fullStr Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center
title_full_unstemmed Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center
title_short Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center
title_sort novel approaches for the lipid sponge phase crystallization of the rhodobacter sphaeroides photosynthetic reaction center
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7642779/
https://www.ncbi.nlm.nih.gov/pubmed/33209319
http://dx.doi.org/10.1107/S2052252520012142
work_keys_str_mv AT selikhanovgeorgii novelapproachesforthelipidspongephasecrystallizationoftherhodobactersphaeroidesphotosyntheticreactioncenter
AT fufinatatiana novelapproachesforthelipidspongephasecrystallizationoftherhodobactersphaeroidesphotosyntheticreactioncenter
AT vasilievalyudmila novelapproachesforthelipidspongephasecrystallizationoftherhodobactersphaeroidesphotosyntheticreactioncenter
AT betzelchristian novelapproachesforthelipidspongephasecrystallizationoftherhodobactersphaeroidesphotosyntheticreactioncenter
AT gabdulkhakovazat novelapproachesforthelipidspongephasecrystallizationoftherhodobactersphaeroidesphotosyntheticreactioncenter