Cargando…
Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center
With the recent developments in the field of free-electron-laser-based serial femtosecond crystallography, the necessity to obtain a large number of high-quality crystals has emerged. In this work crystallization techniques were selected, tested and optimized for the lipid mesophase crystallization...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7642779/ https://www.ncbi.nlm.nih.gov/pubmed/33209319 http://dx.doi.org/10.1107/S2052252520012142 |
_version_ | 1783606150219956224 |
---|---|
author | Selikhanov, Georgii Fufina, Tatiana Vasilieva, Lyudmila Betzel, Christian Gabdulkhakov, Azat |
author_facet | Selikhanov, Georgii Fufina, Tatiana Vasilieva, Lyudmila Betzel, Christian Gabdulkhakov, Azat |
author_sort | Selikhanov, Georgii |
collection | PubMed |
description | With the recent developments in the field of free-electron-laser-based serial femtosecond crystallography, the necessity to obtain a large number of high-quality crystals has emerged. In this work crystallization techniques were selected, tested and optimized for the lipid mesophase crystallization of the Rhodobacter sphaeroides membrane pigment-protein complex, known as the photosynthetic reaction center (RC). Novel approaches for lipid sponge phase crystallization in comparatively large volumes using Hamilton gas-tight glass syringes and plastic pipetting tips are described. An analysis of RC crystal structures obtained by lipid mesophase crystallization revealed non-native ligands that displaced the native electron-transfer cofactors (carotenoid spheroidene and a ubiquinone molecule) from their binding pockets. These ligands were identified and were found to be lipids that are major mesophase components. The selection of distinct co-crystallization conditions with the missing cofactors facilitated the restoration of spheroidene in its binding site. |
format | Online Article Text |
id | pubmed-7642779 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-76427792020-11-17 Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center Selikhanov, Georgii Fufina, Tatiana Vasilieva, Lyudmila Betzel, Christian Gabdulkhakov, Azat IUCrJ Research Papers With the recent developments in the field of free-electron-laser-based serial femtosecond crystallography, the necessity to obtain a large number of high-quality crystals has emerged. In this work crystallization techniques were selected, tested and optimized for the lipid mesophase crystallization of the Rhodobacter sphaeroides membrane pigment-protein complex, known as the photosynthetic reaction center (RC). Novel approaches for lipid sponge phase crystallization in comparatively large volumes using Hamilton gas-tight glass syringes and plastic pipetting tips are described. An analysis of RC crystal structures obtained by lipid mesophase crystallization revealed non-native ligands that displaced the native electron-transfer cofactors (carotenoid spheroidene and a ubiquinone molecule) from their binding pockets. These ligands were identified and were found to be lipids that are major mesophase components. The selection of distinct co-crystallization conditions with the missing cofactors facilitated the restoration of spheroidene in its binding site. International Union of Crystallography 2020-10-03 /pmc/articles/PMC7642779/ /pubmed/33209319 http://dx.doi.org/10.1107/S2052252520012142 Text en © Selikhanov et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Papers Selikhanov, Georgii Fufina, Tatiana Vasilieva, Lyudmila Betzel, Christian Gabdulkhakov, Azat Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center |
title | Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center |
title_full | Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center |
title_fullStr | Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center |
title_full_unstemmed | Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center |
title_short | Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center |
title_sort | novel approaches for the lipid sponge phase crystallization of the rhodobacter sphaeroides photosynthetic reaction center |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7642779/ https://www.ncbi.nlm.nih.gov/pubmed/33209319 http://dx.doi.org/10.1107/S2052252520012142 |
work_keys_str_mv | AT selikhanovgeorgii novelapproachesforthelipidspongephasecrystallizationoftherhodobactersphaeroidesphotosyntheticreactioncenter AT fufinatatiana novelapproachesforthelipidspongephasecrystallizationoftherhodobactersphaeroidesphotosyntheticreactioncenter AT vasilievalyudmila novelapproachesforthelipidspongephasecrystallizationoftherhodobactersphaeroidesphotosyntheticreactioncenter AT betzelchristian novelapproachesforthelipidspongephasecrystallizationoftherhodobactersphaeroidesphotosyntheticreactioncenter AT gabdulkhakovazat novelapproachesforthelipidspongephasecrystallizationoftherhodobactersphaeroidesphotosyntheticreactioncenter |