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Harnessing the power of an X-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase

Serial femtosecond crystallography (SFX) with X-ray free-electron lasers (XFELs) has proven highly successful for structure determination of challenging membrane proteins crystallized in lipidic cubic phase; however, like most techniques, it has limitations. Here we attempt to address some of these...

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Autores principales: Lee, Ming-Yue, Geiger, James, Ishchenko, Andrii, Han, Gye Won, Barty, Anton, White, Thomas A., Gati, Cornelius, Batyuk, Alexander, Hunter, Mark S., Aquila, Andrew, Boutet, Sébastien, Weierstall, Uwe, Cherezov, Vadim, Liu, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7642783/
https://www.ncbi.nlm.nih.gov/pubmed/33209312
http://dx.doi.org/10.1107/S2052252520012701
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author Lee, Ming-Yue
Geiger, James
Ishchenko, Andrii
Han, Gye Won
Barty, Anton
White, Thomas A.
Gati, Cornelius
Batyuk, Alexander
Hunter, Mark S.
Aquila, Andrew
Boutet, Sébastien
Weierstall, Uwe
Cherezov, Vadim
Liu, Wei
author_facet Lee, Ming-Yue
Geiger, James
Ishchenko, Andrii
Han, Gye Won
Barty, Anton
White, Thomas A.
Gati, Cornelius
Batyuk, Alexander
Hunter, Mark S.
Aquila, Andrew
Boutet, Sébastien
Weierstall, Uwe
Cherezov, Vadim
Liu, Wei
author_sort Lee, Ming-Yue
collection PubMed
description Serial femtosecond crystallography (SFX) with X-ray free-electron lasers (XFELs) has proven highly successful for structure determination of challenging membrane proteins crystallized in lipidic cubic phase; however, like most techniques, it has limitations. Here we attempt to address some of these limitations related to the use of a vacuum chamber and the need for attenuation of the XFEL beam, in order to further improve the efficiency of this method. Using an optimized SFX experimental setup in a helium atmosphere, the room-temperature structure of the adenosine A(2A) receptor (A(2A)AR) at 2.0 Å resolution is determined and compared with previous A(2A)AR structures determined in vacuum and/or at cryogenic temperatures. Specifically, the capability of utilizing high XFEL beam transmissions is demonstrated, in conjunction with a high dynamic range detector, to collect high-resolution SFX data while reducing crystalline material consumption and shortening the collection time required for a complete dataset. The experimental setup presented herein can be applied to future SFX applications for protein nanocrystal samples to aid in structure-based discovery efforts of therapeutic targets that are difficult to crystallize.
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spelling pubmed-76427832020-11-17 Harnessing the power of an X-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase Lee, Ming-Yue Geiger, James Ishchenko, Andrii Han, Gye Won Barty, Anton White, Thomas A. Gati, Cornelius Batyuk, Alexander Hunter, Mark S. Aquila, Andrew Boutet, Sébastien Weierstall, Uwe Cherezov, Vadim Liu, Wei IUCrJ Research Letters Serial femtosecond crystallography (SFX) with X-ray free-electron lasers (XFELs) has proven highly successful for structure determination of challenging membrane proteins crystallized in lipidic cubic phase; however, like most techniques, it has limitations. Here we attempt to address some of these limitations related to the use of a vacuum chamber and the need for attenuation of the XFEL beam, in order to further improve the efficiency of this method. Using an optimized SFX experimental setup in a helium atmosphere, the room-temperature structure of the adenosine A(2A) receptor (A(2A)AR) at 2.0 Å resolution is determined and compared with previous A(2A)AR structures determined in vacuum and/or at cryogenic temperatures. Specifically, the capability of utilizing high XFEL beam transmissions is demonstrated, in conjunction with a high dynamic range detector, to collect high-resolution SFX data while reducing crystalline material consumption and shortening the collection time required for a complete dataset. The experimental setup presented herein can be applied to future SFX applications for protein nanocrystal samples to aid in structure-based discovery efforts of therapeutic targets that are difficult to crystallize. International Union of Crystallography 2020-10-15 /pmc/articles/PMC7642783/ /pubmed/33209312 http://dx.doi.org/10.1107/S2052252520012701 Text en © Lee et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Letters
Lee, Ming-Yue
Geiger, James
Ishchenko, Andrii
Han, Gye Won
Barty, Anton
White, Thomas A.
Gati, Cornelius
Batyuk, Alexander
Hunter, Mark S.
Aquila, Andrew
Boutet, Sébastien
Weierstall, Uwe
Cherezov, Vadim
Liu, Wei
Harnessing the power of an X-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase
title Harnessing the power of an X-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase
title_full Harnessing the power of an X-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase
title_fullStr Harnessing the power of an X-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase
title_full_unstemmed Harnessing the power of an X-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase
title_short Harnessing the power of an X-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase
title_sort harnessing the power of an x-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase
topic Research Letters
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7642783/
https://www.ncbi.nlm.nih.gov/pubmed/33209312
http://dx.doi.org/10.1107/S2052252520012701
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