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An automated platform for in situ serial crystallography at room temperature

Direct observation of functional motions in protein structures is highly desirable for understanding how these nanomachineries of life operate at the molecular level. Because cryogenic temperatures are non-physiological and may prohibit or even alter protein structural dynamics, it is necessary to d...

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Autores principales: Ren, Zhong, Wang, Cong, Shin, Heewhan, Bandara, Sepalika, Kumarapperuma, Indika, Ren, Michael Y., Kang, Weijia, Yang, Xiaojing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7642789/
https://www.ncbi.nlm.nih.gov/pubmed/33209315
http://dx.doi.org/10.1107/S2052252520011288
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author Ren, Zhong
Wang, Cong
Shin, Heewhan
Bandara, Sepalika
Kumarapperuma, Indika
Ren, Michael Y.
Kang, Weijia
Yang, Xiaojing
author_facet Ren, Zhong
Wang, Cong
Shin, Heewhan
Bandara, Sepalika
Kumarapperuma, Indika
Ren, Michael Y.
Kang, Weijia
Yang, Xiaojing
author_sort Ren, Zhong
collection PubMed
description Direct observation of functional motions in protein structures is highly desirable for understanding how these nanomachineries of life operate at the molecular level. Because cryogenic temperatures are non-physiological and may prohibit or even alter protein structural dynamics, it is necessary to develop robust X-ray diffraction methods that enable routine data collection at room temperature. We recently reported a crystal-on-crystal device to facilitate in situ diffraction of protein crystals at room temperature devoid of any sample manipulation. Here an automated serial crystallography platform based on this crystal-on-crystal technology is presented. A hardware and software prototype has been implemented, and protocols have been established that allow users to image, recognize and rank hundreds to thousands of protein crystals grown on a chip in optical scanning mode prior to serial introduction of these crystals to an X-ray beam in a programmable and high-throughput manner. This platform has been tested extensively using fragile protein crystals. We demonstrate that with affordable sample consumption, this in situ serial crystallography technology could give rise to room-temperature protein structures of higher resolution and superior map quality for those protein crystals that encounter difficulties during freezing. This serial data collection platform is compatible with both monochromatic oscillation and Laue methods for X-ray diffraction and presents a widely applicable approach for static and dynamic crystallographic studies at room temperature.
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spelling pubmed-76427892020-11-17 An automated platform for in situ serial crystallography at room temperature Ren, Zhong Wang, Cong Shin, Heewhan Bandara, Sepalika Kumarapperuma, Indika Ren, Michael Y. Kang, Weijia Yang, Xiaojing IUCrJ Research Papers Direct observation of functional motions in protein structures is highly desirable for understanding how these nanomachineries of life operate at the molecular level. Because cryogenic temperatures are non-physiological and may prohibit or even alter protein structural dynamics, it is necessary to develop robust X-ray diffraction methods that enable routine data collection at room temperature. We recently reported a crystal-on-crystal device to facilitate in situ diffraction of protein crystals at room temperature devoid of any sample manipulation. Here an automated serial crystallography platform based on this crystal-on-crystal technology is presented. A hardware and software prototype has been implemented, and protocols have been established that allow users to image, recognize and rank hundreds to thousands of protein crystals grown on a chip in optical scanning mode prior to serial introduction of these crystals to an X-ray beam in a programmable and high-throughput manner. This platform has been tested extensively using fragile protein crystals. We demonstrate that with affordable sample consumption, this in situ serial crystallography technology could give rise to room-temperature protein structures of higher resolution and superior map quality for those protein crystals that encounter difficulties during freezing. This serial data collection platform is compatible with both monochromatic oscillation and Laue methods for X-ray diffraction and presents a widely applicable approach for static and dynamic crystallographic studies at room temperature. International Union of Crystallography 2020-09-19 /pmc/articles/PMC7642789/ /pubmed/33209315 http://dx.doi.org/10.1107/S2052252520011288 Text en © Ren et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Papers
Ren, Zhong
Wang, Cong
Shin, Heewhan
Bandara, Sepalika
Kumarapperuma, Indika
Ren, Michael Y.
Kang, Weijia
Yang, Xiaojing
An automated platform for in situ serial crystallography at room temperature
title An automated platform for in situ serial crystallography at room temperature
title_full An automated platform for in situ serial crystallography at room temperature
title_fullStr An automated platform for in situ serial crystallography at room temperature
title_full_unstemmed An automated platform for in situ serial crystallography at room temperature
title_short An automated platform for in situ serial crystallography at room temperature
title_sort automated platform for in situ serial crystallography at room temperature
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7642789/
https://www.ncbi.nlm.nih.gov/pubmed/33209315
http://dx.doi.org/10.1107/S2052252520011288
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