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An automated platform for in situ serial crystallography at room temperature
Direct observation of functional motions in protein structures is highly desirable for understanding how these nanomachineries of life operate at the molecular level. Because cryogenic temperatures are non-physiological and may prohibit or even alter protein structural dynamics, it is necessary to d...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7642789/ https://www.ncbi.nlm.nih.gov/pubmed/33209315 http://dx.doi.org/10.1107/S2052252520011288 |
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author | Ren, Zhong Wang, Cong Shin, Heewhan Bandara, Sepalika Kumarapperuma, Indika Ren, Michael Y. Kang, Weijia Yang, Xiaojing |
author_facet | Ren, Zhong Wang, Cong Shin, Heewhan Bandara, Sepalika Kumarapperuma, Indika Ren, Michael Y. Kang, Weijia Yang, Xiaojing |
author_sort | Ren, Zhong |
collection | PubMed |
description | Direct observation of functional motions in protein structures is highly desirable for understanding how these nanomachineries of life operate at the molecular level. Because cryogenic temperatures are non-physiological and may prohibit or even alter protein structural dynamics, it is necessary to develop robust X-ray diffraction methods that enable routine data collection at room temperature. We recently reported a crystal-on-crystal device to facilitate in situ diffraction of protein crystals at room temperature devoid of any sample manipulation. Here an automated serial crystallography platform based on this crystal-on-crystal technology is presented. A hardware and software prototype has been implemented, and protocols have been established that allow users to image, recognize and rank hundreds to thousands of protein crystals grown on a chip in optical scanning mode prior to serial introduction of these crystals to an X-ray beam in a programmable and high-throughput manner. This platform has been tested extensively using fragile protein crystals. We demonstrate that with affordable sample consumption, this in situ serial crystallography technology could give rise to room-temperature protein structures of higher resolution and superior map quality for those protein crystals that encounter difficulties during freezing. This serial data collection platform is compatible with both monochromatic oscillation and Laue methods for X-ray diffraction and presents a widely applicable approach for static and dynamic crystallographic studies at room temperature. |
format | Online Article Text |
id | pubmed-7642789 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-76427892020-11-17 An automated platform for in situ serial crystallography at room temperature Ren, Zhong Wang, Cong Shin, Heewhan Bandara, Sepalika Kumarapperuma, Indika Ren, Michael Y. Kang, Weijia Yang, Xiaojing IUCrJ Research Papers Direct observation of functional motions in protein structures is highly desirable for understanding how these nanomachineries of life operate at the molecular level. Because cryogenic temperatures are non-physiological and may prohibit or even alter protein structural dynamics, it is necessary to develop robust X-ray diffraction methods that enable routine data collection at room temperature. We recently reported a crystal-on-crystal device to facilitate in situ diffraction of protein crystals at room temperature devoid of any sample manipulation. Here an automated serial crystallography platform based on this crystal-on-crystal technology is presented. A hardware and software prototype has been implemented, and protocols have been established that allow users to image, recognize and rank hundreds to thousands of protein crystals grown on a chip in optical scanning mode prior to serial introduction of these crystals to an X-ray beam in a programmable and high-throughput manner. This platform has been tested extensively using fragile protein crystals. We demonstrate that with affordable sample consumption, this in situ serial crystallography technology could give rise to room-temperature protein structures of higher resolution and superior map quality for those protein crystals that encounter difficulties during freezing. This serial data collection platform is compatible with both monochromatic oscillation and Laue methods for X-ray diffraction and presents a widely applicable approach for static and dynamic crystallographic studies at room temperature. International Union of Crystallography 2020-09-19 /pmc/articles/PMC7642789/ /pubmed/33209315 http://dx.doi.org/10.1107/S2052252520011288 Text en © Ren et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Papers Ren, Zhong Wang, Cong Shin, Heewhan Bandara, Sepalika Kumarapperuma, Indika Ren, Michael Y. Kang, Weijia Yang, Xiaojing An automated platform for in situ serial crystallography at room temperature |
title | An automated platform for in situ serial crystallography at room temperature |
title_full | An automated platform for in situ serial crystallography at room temperature |
title_fullStr | An automated platform for in situ serial crystallography at room temperature |
title_full_unstemmed | An automated platform for in situ serial crystallography at room temperature |
title_short | An automated platform for in situ serial crystallography at room temperature |
title_sort | automated platform for in situ serial crystallography at room temperature |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7642789/ https://www.ncbi.nlm.nih.gov/pubmed/33209315 http://dx.doi.org/10.1107/S2052252520011288 |
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