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Genetic diversity and inter-relationships of fruit bio-chemicals and antioxidant activity in Iranian wild blackberry species
Blackberries are a rich source of bio-chemicals such as anthocyanins and polyphenolic antioxidants. The evaluation of the extent of variation among wild genetic resources can provide useful information for the establishment of effective conservation strategies and future breeding programs. In this s...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7643115/ https://www.ncbi.nlm.nih.gov/pubmed/33149186 http://dx.doi.org/10.1038/s41598-020-75849-1 |
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author | Garazhian, Mehdi Gharaghani, Ali Eshghi, Saeid |
author_facet | Garazhian, Mehdi Gharaghani, Ali Eshghi, Saeid |
author_sort | Garazhian, Mehdi |
collection | PubMed |
description | Blackberries are a rich source of bio-chemicals such as anthocyanins and polyphenolic antioxidants. The evaluation of the extent of variation among wild genetic resources can provide useful information for the establishment of effective conservation strategies and future breeding programs. In this study, variations and inter-relationship of berry weight, total phenol (TP), total soluble solids (TSS), titratable acidity (TA), ascorbic acid (AA), anthocyanin and antioxidant activity were estimated in their values among 57 accessions belonging to 4 different Rubus spp. native to Iran. The experiments were performed during two consecutive years (2014 and 2015). Combine analysis showed that there is no significant difference between the data of 2 years in all measured traits. High or very high levels of variations were detected in berry weight (0.14–1.30 g), antioxidant activity (40.21–88.08%), anthocyanin (80.74–145.09 mg/100 g), TSS (7.9–17.8 °Brix), TA (0.36–0.83%) and AA (9.56–20.92 mg/100 g). This is while TP showed very low levels of variation (109.5–129.1 mg/100 g). Correlation analysis showed that antioxidant activity correlated highly and positively with all of the measured characteristics including ascorbic acid (r = 0.927), anthocyanin (r = 0.752), total phenol (r = 0.681), TSS (r = 0.473) and berry weight (r = 0.541) except for TA. Cluster analysis based on all measured characteristics showed a partial differentiation between the accessions based on their species and, to lesser extent, according to their origin within the main clusters. Based on the bi-plot of the first two PCAs, genotypes and traits classified into four quadrants. This grouping was in agreement with that of cluster analysis, considering the fact that almost all of accessions in quadrants II and III (with a few exceptions) were same to those in the first clade of cluster analysis and the genotypes grouped in quadrants I and IV, represents the accessions of clade 2 in cluster analysis. The projection of the traits vectors in PCA were also fully in accordance to that of correlation analysis in almost all of studied traits. Results showed that a rich source of variations is available considering berry weight, fruit bio-chemical and antioxidant activity in the Iranian wild Rubus species, which needs immediate conservation and worth to be utilized in commercial breeding programs. |
format | Online Article Text |
id | pubmed-7643115 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-76431152020-11-06 Genetic diversity and inter-relationships of fruit bio-chemicals and antioxidant activity in Iranian wild blackberry species Garazhian, Mehdi Gharaghani, Ali Eshghi, Saeid Sci Rep Article Blackberries are a rich source of bio-chemicals such as anthocyanins and polyphenolic antioxidants. The evaluation of the extent of variation among wild genetic resources can provide useful information for the establishment of effective conservation strategies and future breeding programs. In this study, variations and inter-relationship of berry weight, total phenol (TP), total soluble solids (TSS), titratable acidity (TA), ascorbic acid (AA), anthocyanin and antioxidant activity were estimated in their values among 57 accessions belonging to 4 different Rubus spp. native to Iran. The experiments were performed during two consecutive years (2014 and 2015). Combine analysis showed that there is no significant difference between the data of 2 years in all measured traits. High or very high levels of variations were detected in berry weight (0.14–1.30 g), antioxidant activity (40.21–88.08%), anthocyanin (80.74–145.09 mg/100 g), TSS (7.9–17.8 °Brix), TA (0.36–0.83%) and AA (9.56–20.92 mg/100 g). This is while TP showed very low levels of variation (109.5–129.1 mg/100 g). Correlation analysis showed that antioxidant activity correlated highly and positively with all of the measured characteristics including ascorbic acid (r = 0.927), anthocyanin (r = 0.752), total phenol (r = 0.681), TSS (r = 0.473) and berry weight (r = 0.541) except for TA. Cluster analysis based on all measured characteristics showed a partial differentiation between the accessions based on their species and, to lesser extent, according to their origin within the main clusters. Based on the bi-plot of the first two PCAs, genotypes and traits classified into four quadrants. This grouping was in agreement with that of cluster analysis, considering the fact that almost all of accessions in quadrants II and III (with a few exceptions) were same to those in the first clade of cluster analysis and the genotypes grouped in quadrants I and IV, represents the accessions of clade 2 in cluster analysis. The projection of the traits vectors in PCA were also fully in accordance to that of correlation analysis in almost all of studied traits. Results showed that a rich source of variations is available considering berry weight, fruit bio-chemical and antioxidant activity in the Iranian wild Rubus species, which needs immediate conservation and worth to be utilized in commercial breeding programs. Nature Publishing Group UK 2020-11-04 /pmc/articles/PMC7643115/ /pubmed/33149186 http://dx.doi.org/10.1038/s41598-020-75849-1 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Garazhian, Mehdi Gharaghani, Ali Eshghi, Saeid Genetic diversity and inter-relationships of fruit bio-chemicals and antioxidant activity in Iranian wild blackberry species |
title | Genetic diversity and inter-relationships of fruit bio-chemicals and antioxidant activity in Iranian wild blackberry species |
title_full | Genetic diversity and inter-relationships of fruit bio-chemicals and antioxidant activity in Iranian wild blackberry species |
title_fullStr | Genetic diversity and inter-relationships of fruit bio-chemicals and antioxidant activity in Iranian wild blackberry species |
title_full_unstemmed | Genetic diversity and inter-relationships of fruit bio-chemicals and antioxidant activity in Iranian wild blackberry species |
title_short | Genetic diversity and inter-relationships of fruit bio-chemicals and antioxidant activity in Iranian wild blackberry species |
title_sort | genetic diversity and inter-relationships of fruit bio-chemicals and antioxidant activity in iranian wild blackberry species |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7643115/ https://www.ncbi.nlm.nih.gov/pubmed/33149186 http://dx.doi.org/10.1038/s41598-020-75849-1 |
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