Metagenome Proteins and Database Contamination

Continued influx of metagenome-derived proteins with misannotated taxonomy into conventional databases, including RefSeq, threatens to eliminate the value of taxonomy identifiers. To prevent this, urgent efforts should be undertaken by submitters of metagenomic data sets as well as by database manag...

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Detalles Bibliográficos
Autor principal: Arkhipova, Irina R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Commentary
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7643828/
https://www.ncbi.nlm.nih.gov/pubmed/33148820
http://dx.doi.org/10.1128/mSphere.00854-20
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author Arkhipova, Irina R.
author_facet Arkhipova, Irina R.
author_sort Arkhipova, Irina R.
collection PubMed
description Continued influx of metagenome-derived proteins with misannotated taxonomy into conventional databases, including RefSeq, threatens to eliminate the value of taxonomy identifiers. To prevent this, urgent efforts should be undertaken by submitters of metagenomic data sets as well as by database managers.
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spelling pubmed-76438282020-11-17 Metagenome Proteins and Database Contamination Arkhipova, Irina R. mSphere Commentary Continued influx of metagenome-derived proteins with misannotated taxonomy into conventional databases, including RefSeq, threatens to eliminate the value of taxonomy identifiers. To prevent this, urgent efforts should be undertaken by submitters of metagenomic data sets as well as by database managers. American Society for Microbiology 2020-11-04 /pmc/articles/PMC7643828/ /pubmed/33148820 http://dx.doi.org/10.1128/mSphere.00854-20 Text en Copyright © 2020 Arkhipova. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Commentary
Arkhipova, Irina R.
Metagenome Proteins and Database Contamination
title Metagenome Proteins and Database Contamination
title_full Metagenome Proteins and Database Contamination
title_fullStr Metagenome Proteins and Database Contamination
title_full_unstemmed Metagenome Proteins and Database Contamination
title_short Metagenome Proteins and Database Contamination
title_sort metagenome proteins and database contamination
topic Commentary
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7643828/
https://www.ncbi.nlm.nih.gov/pubmed/33148820
http://dx.doi.org/10.1128/mSphere.00854-20
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