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Evaluation of the diagnostic accuracy of an affordable rapid diagnostic test for African Swine Fever antigen detection in Lao People’s Democratic Republic
African Swine Fever (ASF) is a transboundary animal disease of pigs and wild suids that appeared in Lao People's Democratic Republic (Lao PDR) in mid-2019, having spread across China and Vietnam in the months prior. Despite the scale of the Asian ASF pandemic and the availability of pen-side ra...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier/North-Holland Biomedical Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7646196/ https://www.ncbi.nlm.nih.gov/pubmed/32956709 http://dx.doi.org/10.1016/j.jviromet.2020.113975 |
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author | Matsumoto, Nina Siengsanan-Lamont, Jarunee Gleeson, Laurence J. Douangngeun, Bounlom Theppangna, Watthana Khounsy, Syseng Phommachanh, Phouvong Halasa, Tariq Bush, Russell D. Blacksell, Stuart D. |
author_facet | Matsumoto, Nina Siengsanan-Lamont, Jarunee Gleeson, Laurence J. Douangngeun, Bounlom Theppangna, Watthana Khounsy, Syseng Phommachanh, Phouvong Halasa, Tariq Bush, Russell D. Blacksell, Stuart D. |
author_sort | Matsumoto, Nina |
collection | PubMed |
description | African Swine Fever (ASF) is a transboundary animal disease of pigs and wild suids that appeared in Lao People's Democratic Republic (Lao PDR) in mid-2019, having spread across China and Vietnam in the months prior. Despite the scale of the Asian ASF pandemic and the availability of pen-side rapid diagnostic tests (RDT) on the market, few locally produced and easily available ASF RDTs have been evaluated for diagnostic accuracy. In this study, an ASF antigen detection RDT from Shenzhen Lvshiyuan Biotechnology Co. Ltd was evaluated using clinical field samples submitted to the National Animal Health Laboratory (NAHL) from ASF suspect cases between June and December 2019 in Lao PDR. Positive (n = 57) and negative (n = 50) samples of whole blood, serum and haemolysed serum were assessed by RDT and PCR, with the latter used as the gold standard reference comparator. Overall the RDT had a diagnostic sensitivity (DSe) of 65 %, 95 % CI [51–77] and diagnostic specificity (DSp) of 76 %, 95 % CI [62–87]. The RDT demonstrated improved performance on samples with lower PCR cycle threshold (ct) values with each additional cycle reducing the odds of the RDT returning a positive by 17 % relative to the previous cycle, 95 % CI [8 %–28 %] (P < 0.01). While this test shows promise for field application, complete validation of diagnostic accuracy requires a larger sample size. |
format | Online Article Text |
id | pubmed-7646196 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier/North-Holland Biomedical Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-76461962020-12-01 Evaluation of the diagnostic accuracy of an affordable rapid diagnostic test for African Swine Fever antigen detection in Lao People’s Democratic Republic Matsumoto, Nina Siengsanan-Lamont, Jarunee Gleeson, Laurence J. Douangngeun, Bounlom Theppangna, Watthana Khounsy, Syseng Phommachanh, Phouvong Halasa, Tariq Bush, Russell D. Blacksell, Stuart D. J Virol Methods Article African Swine Fever (ASF) is a transboundary animal disease of pigs and wild suids that appeared in Lao People's Democratic Republic (Lao PDR) in mid-2019, having spread across China and Vietnam in the months prior. Despite the scale of the Asian ASF pandemic and the availability of pen-side rapid diagnostic tests (RDT) on the market, few locally produced and easily available ASF RDTs have been evaluated for diagnostic accuracy. In this study, an ASF antigen detection RDT from Shenzhen Lvshiyuan Biotechnology Co. Ltd was evaluated using clinical field samples submitted to the National Animal Health Laboratory (NAHL) from ASF suspect cases between June and December 2019 in Lao PDR. Positive (n = 57) and negative (n = 50) samples of whole blood, serum and haemolysed serum were assessed by RDT and PCR, with the latter used as the gold standard reference comparator. Overall the RDT had a diagnostic sensitivity (DSe) of 65 %, 95 % CI [51–77] and diagnostic specificity (DSp) of 76 %, 95 % CI [62–87]. The RDT demonstrated improved performance on samples with lower PCR cycle threshold (ct) values with each additional cycle reducing the odds of the RDT returning a positive by 17 % relative to the previous cycle, 95 % CI [8 %–28 %] (P < 0.01). While this test shows promise for field application, complete validation of diagnostic accuracy requires a larger sample size. Elsevier/North-Holland Biomedical Press 2020-12 /pmc/articles/PMC7646196/ /pubmed/32956709 http://dx.doi.org/10.1016/j.jviromet.2020.113975 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Matsumoto, Nina Siengsanan-Lamont, Jarunee Gleeson, Laurence J. Douangngeun, Bounlom Theppangna, Watthana Khounsy, Syseng Phommachanh, Phouvong Halasa, Tariq Bush, Russell D. Blacksell, Stuart D. Evaluation of the diagnostic accuracy of an affordable rapid diagnostic test for African Swine Fever antigen detection in Lao People’s Democratic Republic |
title | Evaluation of the diagnostic accuracy of an affordable rapid diagnostic test for African Swine Fever antigen detection in Lao People’s Democratic Republic |
title_full | Evaluation of the diagnostic accuracy of an affordable rapid diagnostic test for African Swine Fever antigen detection in Lao People’s Democratic Republic |
title_fullStr | Evaluation of the diagnostic accuracy of an affordable rapid diagnostic test for African Swine Fever antigen detection in Lao People’s Democratic Republic |
title_full_unstemmed | Evaluation of the diagnostic accuracy of an affordable rapid diagnostic test for African Swine Fever antigen detection in Lao People’s Democratic Republic |
title_short | Evaluation of the diagnostic accuracy of an affordable rapid diagnostic test for African Swine Fever antigen detection in Lao People’s Democratic Republic |
title_sort | evaluation of the diagnostic accuracy of an affordable rapid diagnostic test for african swine fever antigen detection in lao people’s democratic republic |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7646196/ https://www.ncbi.nlm.nih.gov/pubmed/32956709 http://dx.doi.org/10.1016/j.jviromet.2020.113975 |
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