Cargando…
The complete mitochondrial genome of Eutrichosiphum pasaniae (Okajima, 1908) (Hemiptera: Aphididae: Greenideinae)
In this study, we sequenced the complete mitochondrial genome of Eutrichosiphum pasaniae through Illumina platform. The circular mitogenome is 16,500 bp in length and composed of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs), a large control region and...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7646574/ https://www.ncbi.nlm.nih.gov/pubmed/33367053 http://dx.doi.org/10.1080/23802359.2020.1831997 |
_version_ | 1783606817441447936 |
---|---|
author | Li, Cailing Jiang, Liyun Zhang, Xiaolu Chen, Jing Qiao, Gexia |
author_facet | Li, Cailing Jiang, Liyun Zhang, Xiaolu Chen, Jing Qiao, Gexia |
author_sort | Li, Cailing |
collection | PubMed |
description | In this study, we sequenced the complete mitochondrial genome of Eutrichosiphum pasaniae through Illumina platform. The circular mitogenome is 16,500 bp in length and composed of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs), a large control region and a special repeat region. The nucleotide composition of whole mitogenome is strongly AT-biased (85.5%). All PCGs start with ATN and end with TAA except for cox1 which terminates with an incomplete stop codon T. All tRNAs have a typical clover-leaf secondary structure except for trnS (AGN). The lengths of rrnL, rrnS and control region are 1276, 774 and 996 bp, respectively. The repeat region with a length of 909 bp is located between trnE and trnF and consists of 4.1 repeat units. The phylogenetic tree supports the sister relationship of Eutrichosiphum pasaniae and Greenidea psidii. |
format | Online Article Text |
id | pubmed-7646574 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76465742020-12-22 The complete mitochondrial genome of Eutrichosiphum pasaniae (Okajima, 1908) (Hemiptera: Aphididae: Greenideinae) Li, Cailing Jiang, Liyun Zhang, Xiaolu Chen, Jing Qiao, Gexia Mitochondrial DNA B Resour Mitogenome Announcement In this study, we sequenced the complete mitochondrial genome of Eutrichosiphum pasaniae through Illumina platform. The circular mitogenome is 16,500 bp in length and composed of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs), a large control region and a special repeat region. The nucleotide composition of whole mitogenome is strongly AT-biased (85.5%). All PCGs start with ATN and end with TAA except for cox1 which terminates with an incomplete stop codon T. All tRNAs have a typical clover-leaf secondary structure except for trnS (AGN). The lengths of rrnL, rrnS and control region are 1276, 774 and 996 bp, respectively. The repeat region with a length of 909 bp is located between trnE and trnF and consists of 4.1 repeat units. The phylogenetic tree supports the sister relationship of Eutrichosiphum pasaniae and Greenidea psidii. Taylor & Francis 2020-11-03 /pmc/articles/PMC7646574/ /pubmed/33367053 http://dx.doi.org/10.1080/23802359.2020.1831997 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Li, Cailing Jiang, Liyun Zhang, Xiaolu Chen, Jing Qiao, Gexia The complete mitochondrial genome of Eutrichosiphum pasaniae (Okajima, 1908) (Hemiptera: Aphididae: Greenideinae) |
title | The complete mitochondrial genome of Eutrichosiphum pasaniae (Okajima, 1908) (Hemiptera: Aphididae: Greenideinae) |
title_full | The complete mitochondrial genome of Eutrichosiphum pasaniae (Okajima, 1908) (Hemiptera: Aphididae: Greenideinae) |
title_fullStr | The complete mitochondrial genome of Eutrichosiphum pasaniae (Okajima, 1908) (Hemiptera: Aphididae: Greenideinae) |
title_full_unstemmed | The complete mitochondrial genome of Eutrichosiphum pasaniae (Okajima, 1908) (Hemiptera: Aphididae: Greenideinae) |
title_short | The complete mitochondrial genome of Eutrichosiphum pasaniae (Okajima, 1908) (Hemiptera: Aphididae: Greenideinae) |
title_sort | complete mitochondrial genome of eutrichosiphum pasaniae (okajima, 1908) (hemiptera: aphididae: greenideinae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7646574/ https://www.ncbi.nlm.nih.gov/pubmed/33367053 http://dx.doi.org/10.1080/23802359.2020.1831997 |
work_keys_str_mv | AT licailing thecompletemitochondrialgenomeofeutrichosiphumpasaniaeokajima1908hemipteraaphididaegreenideinae AT jiangliyun thecompletemitochondrialgenomeofeutrichosiphumpasaniaeokajima1908hemipteraaphididaegreenideinae AT zhangxiaolu thecompletemitochondrialgenomeofeutrichosiphumpasaniaeokajima1908hemipteraaphididaegreenideinae AT chenjing thecompletemitochondrialgenomeofeutrichosiphumpasaniaeokajima1908hemipteraaphididaegreenideinae AT qiaogexia thecompletemitochondrialgenomeofeutrichosiphumpasaniaeokajima1908hemipteraaphididaegreenideinae AT licailing completemitochondrialgenomeofeutrichosiphumpasaniaeokajima1908hemipteraaphididaegreenideinae AT jiangliyun completemitochondrialgenomeofeutrichosiphumpasaniaeokajima1908hemipteraaphididaegreenideinae AT zhangxiaolu completemitochondrialgenomeofeutrichosiphumpasaniaeokajima1908hemipteraaphididaegreenideinae AT chenjing completemitochondrialgenomeofeutrichosiphumpasaniaeokajima1908hemipteraaphididaegreenideinae AT qiaogexia completemitochondrialgenomeofeutrichosiphumpasaniaeokajima1908hemipteraaphididaegreenideinae |