The complete chloroplast genome sequence of Euphorbia lathyris L. (Euphorbiaceae)

Euphorbia lathyris L. is a well-known bioenergy plant cultivated in many parts of the world. In this study, we sequenced the complete chloroplast (cp) genome sequence of E. lathyris to investigate its phylogenetic relationship in the family Euphorbiaceae. The cp genome was 163,738 bp in length, cons...

Descripción completa

Detalles Bibliográficos
Autores principales: Ma, Wenqi, Lv, Chaogeng, Jiang, Daiquan, Kang, Chuanzhi, Zhao, Dan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7646597/
https://www.ncbi.nlm.nih.gov/pubmed/33367057
http://dx.doi.org/10.1080/23802359.2020.1832601
_version_ 1783606822389678080
author Ma, Wenqi
Lv, Chaogeng
Jiang, Daiquan
Kang, Chuanzhi
Zhao, Dan
author_facet Ma, Wenqi
Lv, Chaogeng
Jiang, Daiquan
Kang, Chuanzhi
Zhao, Dan
author_sort Ma, Wenqi
collection PubMed
description Euphorbia lathyris L. is a well-known bioenergy plant cultivated in many parts of the world. In this study, we sequenced the complete chloroplast (cp) genome sequence of E. lathyris to investigate its phylogenetic relationship in the family Euphorbiaceae. The cp genome was 163,738 bp in length, consisting of a pair of inverted repeats (IRa and IRb: 26,837 bp) separated by a large single-copy region (LSC: 91,783 bp) and a small single-copy region (SSC: 18,281 bp). The GC content of whole cp genome is 35.6%. Annotation showed the presence of 113 unique genes with 79 protein-coding genes, four tRNA genes, and 30 rRNA genes. Phylogenetic analysis indicated that E. lathyris was in the basal position of subgen. Esula, closely related to sect. Esula and sect. Helioscopiae.
format Online
Article
Text
id pubmed-7646597
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-76465972020-12-22 The complete chloroplast genome sequence of Euphorbia lathyris L. (Euphorbiaceae) Ma, Wenqi Lv, Chaogeng Jiang, Daiquan Kang, Chuanzhi Zhao, Dan Mitochondrial DNA B Resour Mitogenome Announcement Euphorbia lathyris L. is a well-known bioenergy plant cultivated in many parts of the world. In this study, we sequenced the complete chloroplast (cp) genome sequence of E. lathyris to investigate its phylogenetic relationship in the family Euphorbiaceae. The cp genome was 163,738 bp in length, consisting of a pair of inverted repeats (IRa and IRb: 26,837 bp) separated by a large single-copy region (LSC: 91,783 bp) and a small single-copy region (SSC: 18,281 bp). The GC content of whole cp genome is 35.6%. Annotation showed the presence of 113 unique genes with 79 protein-coding genes, four tRNA genes, and 30 rRNA genes. Phylogenetic analysis indicated that E. lathyris was in the basal position of subgen. Esula, closely related to sect. Esula and sect. Helioscopiae. Taylor & Francis 2020-11-03 /pmc/articles/PMC7646597/ /pubmed/33367057 http://dx.doi.org/10.1080/23802359.2020.1832601 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ma, Wenqi
Lv, Chaogeng
Jiang, Daiquan
Kang, Chuanzhi
Zhao, Dan
The complete chloroplast genome sequence of Euphorbia lathyris L. (Euphorbiaceae)
title The complete chloroplast genome sequence of Euphorbia lathyris L. (Euphorbiaceae)
title_full The complete chloroplast genome sequence of Euphorbia lathyris L. (Euphorbiaceae)
title_fullStr The complete chloroplast genome sequence of Euphorbia lathyris L. (Euphorbiaceae)
title_full_unstemmed The complete chloroplast genome sequence of Euphorbia lathyris L. (Euphorbiaceae)
title_short The complete chloroplast genome sequence of Euphorbia lathyris L. (Euphorbiaceae)
title_sort complete chloroplast genome sequence of euphorbia lathyris l. (euphorbiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7646597/
https://www.ncbi.nlm.nih.gov/pubmed/33367057
http://dx.doi.org/10.1080/23802359.2020.1832601
work_keys_str_mv AT mawenqi thecompletechloroplastgenomesequenceofeuphorbialathyrisleuphorbiaceae
AT lvchaogeng thecompletechloroplastgenomesequenceofeuphorbialathyrisleuphorbiaceae
AT jiangdaiquan thecompletechloroplastgenomesequenceofeuphorbialathyrisleuphorbiaceae
AT kangchuanzhi thecompletechloroplastgenomesequenceofeuphorbialathyrisleuphorbiaceae
AT zhaodan thecompletechloroplastgenomesequenceofeuphorbialathyrisleuphorbiaceae
AT mawenqi completechloroplastgenomesequenceofeuphorbialathyrisleuphorbiaceae
AT lvchaogeng completechloroplastgenomesequenceofeuphorbialathyrisleuphorbiaceae
AT jiangdaiquan completechloroplastgenomesequenceofeuphorbialathyrisleuphorbiaceae
AT kangchuanzhi completechloroplastgenomesequenceofeuphorbialathyrisleuphorbiaceae
AT zhaodan completechloroplastgenomesequenceofeuphorbialathyrisleuphorbiaceae

Ejemplares similares