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Differentiation of COVID-19 conditions in planar chest radiographs using optimized convolutional neural networks

In this study, an attempt has been made to differentiate Novel Coronavirus-2019 (COVID-19) conditions from healthy subjects in Chest radiographs using a simplified end-to-end Convolutional Neural Network (CNN) model and occlusion sensitivity maps. Early detection and faster automated screening of th...

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Autores principales: Govindarajan, Satyavratan, Swaminathan, Ramakrishnan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7647189/
https://www.ncbi.nlm.nih.gov/pubmed/34764563
http://dx.doi.org/10.1007/s10489-020-01941-8
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author Govindarajan, Satyavratan
Swaminathan, Ramakrishnan
author_facet Govindarajan, Satyavratan
Swaminathan, Ramakrishnan
author_sort Govindarajan, Satyavratan
collection PubMed
description In this study, an attempt has been made to differentiate Novel Coronavirus-2019 (COVID-19) conditions from healthy subjects in Chest radiographs using a simplified end-to-end Convolutional Neural Network (CNN) model and occlusion sensitivity maps. Early detection and faster automated screening of the COVID-19 patients is essential. For this, the images are considered from publicly available datasets. Significant biomarkers representing critical image features are extracted from CNN by experimentally investigating on cross-validation methods and hyperparameter settings. The performance of the network is evaluated using standard metrics. Perturbation based occlusion sensitivity maps are employed on the features obtained from the classification model to visualise the localization of abnormal areas. Results demonstrate that the simplified CNN model with optimised parameters is able to extract significant features with a sensitivity of 97.35% and F-measure of 96.71% to detect COVID-19 images. The algorithm achieves an Area Under the Curve-Receiver Operating Characteristic score of 99.4% with Matthews correlation coefficient of 0.93. High value of Diagnostic odds ratio is also obtained. Occlusion sensitivity maps provide precise localization of abnormal regions by identifying COVID-19 conditions. As early detection through chest radiographic images are useful for automated screening of the disease, this method appears to be clinically relevant in providing a visual diagnostic solution using a simplified and efficient model.
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spelling pubmed-76471892020-11-06 Differentiation of COVID-19 conditions in planar chest radiographs using optimized convolutional neural networks Govindarajan, Satyavratan Swaminathan, Ramakrishnan Appl Intell (Dordr) Article In this study, an attempt has been made to differentiate Novel Coronavirus-2019 (COVID-19) conditions from healthy subjects in Chest radiographs using a simplified end-to-end Convolutional Neural Network (CNN) model and occlusion sensitivity maps. Early detection and faster automated screening of the COVID-19 patients is essential. For this, the images are considered from publicly available datasets. Significant biomarkers representing critical image features are extracted from CNN by experimentally investigating on cross-validation methods and hyperparameter settings. The performance of the network is evaluated using standard metrics. Perturbation based occlusion sensitivity maps are employed on the features obtained from the classification model to visualise the localization of abnormal areas. Results demonstrate that the simplified CNN model with optimised parameters is able to extract significant features with a sensitivity of 97.35% and F-measure of 96.71% to detect COVID-19 images. The algorithm achieves an Area Under the Curve-Receiver Operating Characteristic score of 99.4% with Matthews correlation coefficient of 0.93. High value of Diagnostic odds ratio is also obtained. Occlusion sensitivity maps provide precise localization of abnormal regions by identifying COVID-19 conditions. As early detection through chest radiographic images are useful for automated screening of the disease, this method appears to be clinically relevant in providing a visual diagnostic solution using a simplified and efficient model. Springer US 2020-11-06 2021 /pmc/articles/PMC7647189/ /pubmed/34764563 http://dx.doi.org/10.1007/s10489-020-01941-8 Text en © Springer Science+Business Media, LLC, part of Springer Nature 2020, corrected publication 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Govindarajan, Satyavratan
Swaminathan, Ramakrishnan
Differentiation of COVID-19 conditions in planar chest radiographs using optimized convolutional neural networks
title Differentiation of COVID-19 conditions in planar chest radiographs using optimized convolutional neural networks
title_full Differentiation of COVID-19 conditions in planar chest radiographs using optimized convolutional neural networks
title_fullStr Differentiation of COVID-19 conditions in planar chest radiographs using optimized convolutional neural networks
title_full_unstemmed Differentiation of COVID-19 conditions in planar chest radiographs using optimized convolutional neural networks
title_short Differentiation of COVID-19 conditions in planar chest radiographs using optimized convolutional neural networks
title_sort differentiation of covid-19 conditions in planar chest radiographs using optimized convolutional neural networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7647189/
https://www.ncbi.nlm.nih.gov/pubmed/34764563
http://dx.doi.org/10.1007/s10489-020-01941-8
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