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Sub-nanoliter metabolomics via mass spectrometry to characterize volume-limited samples
The human metabolome provides a window into the mechanisms and biomarkers of various diseases. However, because of limited availability, many sample types are still difficult to study by metabolomic analyses. Here, we present a mass spectrometry (MS)-based metabolomics strategy that only consumes su...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7648103/ https://www.ncbi.nlm.nih.gov/pubmed/33159052 http://dx.doi.org/10.1038/s41467-020-19444-y |
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author | Li, Yafeng Bouza, Marcos Wu, Changsheng Guo, Hengyu Huang, Danning Doron, Gilad Temenoff, Johnna S. Stecenko, Arlene A. Wang, Zhong Lin Fernández, Facundo M. |
author_facet | Li, Yafeng Bouza, Marcos Wu, Changsheng Guo, Hengyu Huang, Danning Doron, Gilad Temenoff, Johnna S. Stecenko, Arlene A. Wang, Zhong Lin Fernández, Facundo M. |
author_sort | Li, Yafeng |
collection | PubMed |
description | The human metabolome provides a window into the mechanisms and biomarkers of various diseases. However, because of limited availability, many sample types are still difficult to study by metabolomic analyses. Here, we present a mass spectrometry (MS)-based metabolomics strategy that only consumes sub-nanoliter sample volumes. The approach consists of combining a customized metabolomics workflow with a pulsed MS ion generation method, known as triboelectric nanogenerator inductive nanoelectrospray ionization (TENGi nanoESI) MS. Samples tested with this approach include exhaled breath condensate collected from cystic fibrosis patients as well as in vitro-cultured human mesenchymal stromal cells. Both test samples are only available in minimum amounts. Experiments show that picoliter-volume spray pulses suffice to generate high-quality spectral fingerprints, which increase the information density produced per unit sample volume. This TENGi nanoESI strategy has the potential to fill in the gap in metabolomics where liquid chromatography-MS-based analyses cannot be applied. Our method opens up avenues for future investigations into understanding metabolic changes caused by diseases or external stimuli. |
format | Online Article Text |
id | pubmed-7648103 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-76481032020-11-10 Sub-nanoliter metabolomics via mass spectrometry to characterize volume-limited samples Li, Yafeng Bouza, Marcos Wu, Changsheng Guo, Hengyu Huang, Danning Doron, Gilad Temenoff, Johnna S. Stecenko, Arlene A. Wang, Zhong Lin Fernández, Facundo M. Nat Commun Article The human metabolome provides a window into the mechanisms and biomarkers of various diseases. However, because of limited availability, many sample types are still difficult to study by metabolomic analyses. Here, we present a mass spectrometry (MS)-based metabolomics strategy that only consumes sub-nanoliter sample volumes. The approach consists of combining a customized metabolomics workflow with a pulsed MS ion generation method, known as triboelectric nanogenerator inductive nanoelectrospray ionization (TENGi nanoESI) MS. Samples tested with this approach include exhaled breath condensate collected from cystic fibrosis patients as well as in vitro-cultured human mesenchymal stromal cells. Both test samples are only available in minimum amounts. Experiments show that picoliter-volume spray pulses suffice to generate high-quality spectral fingerprints, which increase the information density produced per unit sample volume. This TENGi nanoESI strategy has the potential to fill in the gap in metabolomics where liquid chromatography-MS-based analyses cannot be applied. Our method opens up avenues for future investigations into understanding metabolic changes caused by diseases or external stimuli. Nature Publishing Group UK 2020-11-06 /pmc/articles/PMC7648103/ /pubmed/33159052 http://dx.doi.org/10.1038/s41467-020-19444-y Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Li, Yafeng Bouza, Marcos Wu, Changsheng Guo, Hengyu Huang, Danning Doron, Gilad Temenoff, Johnna S. Stecenko, Arlene A. Wang, Zhong Lin Fernández, Facundo M. Sub-nanoliter metabolomics via mass spectrometry to characterize volume-limited samples |
title | Sub-nanoliter metabolomics via mass spectrometry to characterize volume-limited samples |
title_full | Sub-nanoliter metabolomics via mass spectrometry to characterize volume-limited samples |
title_fullStr | Sub-nanoliter metabolomics via mass spectrometry to characterize volume-limited samples |
title_full_unstemmed | Sub-nanoliter metabolomics via mass spectrometry to characterize volume-limited samples |
title_short | Sub-nanoliter metabolomics via mass spectrometry to characterize volume-limited samples |
title_sort | sub-nanoliter metabolomics via mass spectrometry to characterize volume-limited samples |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7648103/ https://www.ncbi.nlm.nih.gov/pubmed/33159052 http://dx.doi.org/10.1038/s41467-020-19444-y |
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