Cargando…
Identification and utilization of copy number information for correcting Hi-C contact map of cancer cell lines
BACKGROUND: Hi-C and its variant techniques have been developed to capture the spatial organization of chromatin. Normalization of Hi-C contact map is essential for accurate modeling and interpretation of high-throughput chromatin conformation capture (3C) experiments. Hi-C correction tools were ori...
Autores principales: | Khalil, Ahmed Ibrahim Samir, Muzaki, Siti Rawaidah Binte Mohammad, Chattopadhyay, Anupam, Sanyal, Amartya |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7648276/ https://www.ncbi.nlm.nih.gov/pubmed/33160308 http://dx.doi.org/10.1186/s12859-020-03832-8 |
Ejemplares similares
-
Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes
por: Khalil, Ahmed Ibrahim Samir, et al.
Publicado: (2020) -
Analysis of Aneuploidy Spectrum From Whole-Genome Sequencing Provides Rapid Assessment of Clonal Variation Within Established Cancer Cell Lines
por: Khalil, Ahmed Ibrahim Samir, et al.
Publicado: (2021) -
Effective normalization for copy number variation in Hi-C data
por: Servant, Nicolas, et al.
Publicado: (2018) -
Spatial inter-centromeric interactions facilitated the emergence of evolutionary new centromeres
por: Guin, Krishnendu, et al.
Publicado: (2020) -
Fine mapping chromatin contacts in capture Hi-C data
por: Eijsbouts, Christiaan Q, et al.
Publicado: (2019)