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Effect of acute noise trauma on the gene expression profile of the hippocampus
BACKGROUND: This study aimed to investigate the changes in the expression of hippocampal genes upon acute noise exposure. METHODS: Three-week-old Sprague–Dawley rats were assigned to control (n = 15) and noise (n = 15) groups. White noise (2–20 kHz, 115 dB sound pressure level [SPL]) was delivered f...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7648995/ https://www.ncbi.nlm.nih.gov/pubmed/33160313 http://dx.doi.org/10.1186/s12868-020-00599-9 |
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author | Lee, Chang Ho Kim, Kyung Woon Lee, So Min Kim, So Young |
author_facet | Lee, Chang Ho Kim, Kyung Woon Lee, So Min Kim, So Young |
author_sort | Lee, Chang Ho |
collection | PubMed |
description | BACKGROUND: This study aimed to investigate the changes in the expression of hippocampal genes upon acute noise exposure. METHODS: Three-week-old Sprague–Dawley rats were assigned to control (n = 15) and noise (n = 15) groups. White noise (2–20 kHz, 115 dB sound pressure level [SPL]) was delivered for 4 h per day for 3 days to the noise group. All rats were sacrificed on the last day of noise exposure, and gene expression in the hippocampus was analyzed using a microarray. Pathway analyses were conducted for genes that showed differential expression ≥ 1.5-fold and P ≤ 0.05 compared to the control group. The genes included in the putative pathways were measured using quantitative reverse transcription-polymerase chain reaction (qRT-PCR). RESULTS: Thirty-eight upregulated genes and 81 downregulated genes were identified. The pathway analyses revealed that upregulated genes were involved in the cellular responses to external stimuli and immune system pathways. qRT-PCR confirmed the upregulation of the involved genes. The downregulated genes were involved in neuronal systems and synapse-related pathways, and qRT-PCR confirmed the downregulation of the involved genes. CONCLUSIONS: Acute noise exposure upregulated the expression of immune-related genes and downregulated the expression of neurotransmission-related genes in the hippocampus. |
format | Online Article Text |
id | pubmed-7648995 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-76489952020-11-09 Effect of acute noise trauma on the gene expression profile of the hippocampus Lee, Chang Ho Kim, Kyung Woon Lee, So Min Kim, So Young BMC Neurosci Research Article BACKGROUND: This study aimed to investigate the changes in the expression of hippocampal genes upon acute noise exposure. METHODS: Three-week-old Sprague–Dawley rats were assigned to control (n = 15) and noise (n = 15) groups. White noise (2–20 kHz, 115 dB sound pressure level [SPL]) was delivered for 4 h per day for 3 days to the noise group. All rats were sacrificed on the last day of noise exposure, and gene expression in the hippocampus was analyzed using a microarray. Pathway analyses were conducted for genes that showed differential expression ≥ 1.5-fold and P ≤ 0.05 compared to the control group. The genes included in the putative pathways were measured using quantitative reverse transcription-polymerase chain reaction (qRT-PCR). RESULTS: Thirty-eight upregulated genes and 81 downregulated genes were identified. The pathway analyses revealed that upregulated genes were involved in the cellular responses to external stimuli and immune system pathways. qRT-PCR confirmed the upregulation of the involved genes. The downregulated genes were involved in neuronal systems and synapse-related pathways, and qRT-PCR confirmed the downregulation of the involved genes. CONCLUSIONS: Acute noise exposure upregulated the expression of immune-related genes and downregulated the expression of neurotransmission-related genes in the hippocampus. BioMed Central 2020-11-07 /pmc/articles/PMC7648995/ /pubmed/33160313 http://dx.doi.org/10.1186/s12868-020-00599-9 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Lee, Chang Ho Kim, Kyung Woon Lee, So Min Kim, So Young Effect of acute noise trauma on the gene expression profile of the hippocampus |
title | Effect of acute noise trauma on the gene expression profile of the hippocampus |
title_full | Effect of acute noise trauma on the gene expression profile of the hippocampus |
title_fullStr | Effect of acute noise trauma on the gene expression profile of the hippocampus |
title_full_unstemmed | Effect of acute noise trauma on the gene expression profile of the hippocampus |
title_short | Effect of acute noise trauma on the gene expression profile of the hippocampus |
title_sort | effect of acute noise trauma on the gene expression profile of the hippocampus |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7648995/ https://www.ncbi.nlm.nih.gov/pubmed/33160313 http://dx.doi.org/10.1186/s12868-020-00599-9 |
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