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Lipid Dynamics in Membranes Slowed Down by Transmembrane Proteins
Lipids and proteins, as essential components of biological cell membranes, exhibit a significant degree of freedom for different kinds of motions including lateral long-range mobility. Due to their interactions, they not only preserve the cellular membrane but also contribute to many important cellu...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7649217/ https://www.ncbi.nlm.nih.gov/pubmed/33195218 http://dx.doi.org/10.3389/fcell.2020.579388 |
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author | Ebersberger, Lisa Schindler, Torben Kirsch, Sonja A. Pluhackova, Kristyna Schambony, Alexandra Seydel, Tilo Böckmann, Rainer A. Unruh, Tobias |
author_facet | Ebersberger, Lisa Schindler, Torben Kirsch, Sonja A. Pluhackova, Kristyna Schambony, Alexandra Seydel, Tilo Böckmann, Rainer A. Unruh, Tobias |
author_sort | Ebersberger, Lisa |
collection | PubMed |
description | Lipids and proteins, as essential components of biological cell membranes, exhibit a significant degree of freedom for different kinds of motions including lateral long-range mobility. Due to their interactions, they not only preserve the cellular membrane but also contribute to many important cellular functions as e.g., signal transport or molecular exchange of the cell with its surrounding. Many of these processes take place on a short time (up to some nanoseconds) and length scale (up to some nanometers) which is perfectly accessible by quasielastic neutron scattering (QENS) experiments and molecular dynamics (MD) simulations. In order to probe the influence of a peptide, a transmembrane sequence of the transferrin receptor (TFRC) protein, on the dynamics of 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) large unilamellar vesicles (LUVs) on a nanosecond time scale, high-resolution QENS experiments and complementary MD simulations have been utilized. By using different scattering contrasts in the experiment (chain-deuterated lipids and protonated lipids, respectively), a model could be developed which allows to examine the lipid and peptide dynamics separately. The experimental results revealed a restricted lipid lateral mobility in the presence of the TFRC transmembrane peptides. Also the apparent self-diffusion coefficient of the lateral movement of the peptide molecules could be determined quantitatively for the probed short-time regime. The findings could be confirmed very precisely by MD simulations. Furthermore, the article presents an estimation for the radius of influence of the peptides on the lipid long-range dynamics which could be determined by consistently combining results from experiment and simulation. |
format | Online Article Text |
id | pubmed-7649217 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-76492172020-11-13 Lipid Dynamics in Membranes Slowed Down by Transmembrane Proteins Ebersberger, Lisa Schindler, Torben Kirsch, Sonja A. Pluhackova, Kristyna Schambony, Alexandra Seydel, Tilo Böckmann, Rainer A. Unruh, Tobias Front Cell Dev Biol Cell and Developmental Biology Lipids and proteins, as essential components of biological cell membranes, exhibit a significant degree of freedom for different kinds of motions including lateral long-range mobility. Due to their interactions, they not only preserve the cellular membrane but also contribute to many important cellular functions as e.g., signal transport or molecular exchange of the cell with its surrounding. Many of these processes take place on a short time (up to some nanoseconds) and length scale (up to some nanometers) which is perfectly accessible by quasielastic neutron scattering (QENS) experiments and molecular dynamics (MD) simulations. In order to probe the influence of a peptide, a transmembrane sequence of the transferrin receptor (TFRC) protein, on the dynamics of 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) large unilamellar vesicles (LUVs) on a nanosecond time scale, high-resolution QENS experiments and complementary MD simulations have been utilized. By using different scattering contrasts in the experiment (chain-deuterated lipids and protonated lipids, respectively), a model could be developed which allows to examine the lipid and peptide dynamics separately. The experimental results revealed a restricted lipid lateral mobility in the presence of the TFRC transmembrane peptides. Also the apparent self-diffusion coefficient of the lateral movement of the peptide molecules could be determined quantitatively for the probed short-time regime. The findings could be confirmed very precisely by MD simulations. Furthermore, the article presents an estimation for the radius of influence of the peptides on the lipid long-range dynamics which could be determined by consistently combining results from experiment and simulation. Frontiers Media S.A. 2020-10-26 /pmc/articles/PMC7649217/ /pubmed/33195218 http://dx.doi.org/10.3389/fcell.2020.579388 Text en Copyright © 2020 Ebersberger, Schindler, Kirsch, Pluhackova, Schambony, Seydel, Böckmann and Unruh. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cell and Developmental Biology Ebersberger, Lisa Schindler, Torben Kirsch, Sonja A. Pluhackova, Kristyna Schambony, Alexandra Seydel, Tilo Böckmann, Rainer A. Unruh, Tobias Lipid Dynamics in Membranes Slowed Down by Transmembrane Proteins |
title | Lipid Dynamics in Membranes Slowed Down by Transmembrane Proteins |
title_full | Lipid Dynamics in Membranes Slowed Down by Transmembrane Proteins |
title_fullStr | Lipid Dynamics in Membranes Slowed Down by Transmembrane Proteins |
title_full_unstemmed | Lipid Dynamics in Membranes Slowed Down by Transmembrane Proteins |
title_short | Lipid Dynamics in Membranes Slowed Down by Transmembrane Proteins |
title_sort | lipid dynamics in membranes slowed down by transmembrane proteins |
topic | Cell and Developmental Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7649217/ https://www.ncbi.nlm.nih.gov/pubmed/33195218 http://dx.doi.org/10.3389/fcell.2020.579388 |
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