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Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record

OBJECTIVE: Our objective is to create a source of synthetic electronic health records that is readily available; suited to industrial, innovation, research, and educational uses; and free of legal, privacy, security, and intellectual property restrictions. MATERIALS AND METHODS: We developed Synthea...

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Autores principales: Walonoski, Jason, Kramer, Mark, Nichols, Joseph, Quina, Andre, Moesel, Chris, Hall, Dylan, Duffett, Carlton, Dube, Kudakwashe, Gallagher, Thomas, McLachlan, Scott
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7651916/
https://www.ncbi.nlm.nih.gov/pubmed/29025144
http://dx.doi.org/10.1093/jamia/ocx079
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author Walonoski, Jason
Kramer, Mark
Nichols, Joseph
Quina, Andre
Moesel, Chris
Hall, Dylan
Duffett, Carlton
Dube, Kudakwashe
Gallagher, Thomas
McLachlan, Scott
author_facet Walonoski, Jason
Kramer, Mark
Nichols, Joseph
Quina, Andre
Moesel, Chris
Hall, Dylan
Duffett, Carlton
Dube, Kudakwashe
Gallagher, Thomas
McLachlan, Scott
author_sort Walonoski, Jason
collection PubMed
description OBJECTIVE: Our objective is to create a source of synthetic electronic health records that is readily available; suited to industrial, innovation, research, and educational uses; and free of legal, privacy, security, and intellectual property restrictions. MATERIALS AND METHODS: We developed Synthea, an open-source software package that simulates the lifespans of synthetic patients, modeling the 10 most frequent reasons for primary care encounters and the 10 chronic conditions with the highest morbidity in the United States. RESULTS: Synthea adheres to a previously developed conceptual framework, scales via open-source deployment on the Internet, and may be extended with additional disease and treatment modules developed by its user community. One million synthetic patient records are now freely available online, encoded in standard formats (eg, Health Level-7 [HL7] Fast Healthcare Interoperability Resources [FHIR] and Consolidated-Clinical Document Architecture), and accessible through an HL7 FHIR application program interface. DISCUSSION: Health care lags other industries in information technology, data exchange, and interoperability. The lack of freely distributable health records has long hindered innovation in health care. Approaches and tools are available to inexpensively generate synthetic health records at scale without accidental disclosure risk, lowering current barriers to entry for promising early-stage developments. By engaging a growing community of users, the synthetic data generated will become increasingly comprehensive, detailed, and realistic over time. CONCLUSION: Synthetic patients can be simulated with models of disease progression and corresponding standards of care to produce risk-free realistic synthetic health care records at scale.
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spelling pubmed-76519162020-11-30 Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record Walonoski, Jason Kramer, Mark Nichols, Joseph Quina, Andre Moesel, Chris Hall, Dylan Duffett, Carlton Dube, Kudakwashe Gallagher, Thomas McLachlan, Scott J Am Med Inform Assoc Research and Applications OBJECTIVE: Our objective is to create a source of synthetic electronic health records that is readily available; suited to industrial, innovation, research, and educational uses; and free of legal, privacy, security, and intellectual property restrictions. MATERIALS AND METHODS: We developed Synthea, an open-source software package that simulates the lifespans of synthetic patients, modeling the 10 most frequent reasons for primary care encounters and the 10 chronic conditions with the highest morbidity in the United States. RESULTS: Synthea adheres to a previously developed conceptual framework, scales via open-source deployment on the Internet, and may be extended with additional disease and treatment modules developed by its user community. One million synthetic patient records are now freely available online, encoded in standard formats (eg, Health Level-7 [HL7] Fast Healthcare Interoperability Resources [FHIR] and Consolidated-Clinical Document Architecture), and accessible through an HL7 FHIR application program interface. DISCUSSION: Health care lags other industries in information technology, data exchange, and interoperability. The lack of freely distributable health records has long hindered innovation in health care. Approaches and tools are available to inexpensively generate synthetic health records at scale without accidental disclosure risk, lowering current barriers to entry for promising early-stage developments. By engaging a growing community of users, the synthetic data generated will become increasingly comprehensive, detailed, and realistic over time. CONCLUSION: Synthetic patients can be simulated with models of disease progression and corresponding standards of care to produce risk-free realistic synthetic health care records at scale. Oxford University Press 2018-03 2017-08-30 /pmc/articles/PMC7651916/ /pubmed/29025144 http://dx.doi.org/10.1093/jamia/ocx079 Text en © The Author 2017. Published by Oxford University Press on behalf of the American Medical Informatics Association. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Research and Applications
Walonoski, Jason
Kramer, Mark
Nichols, Joseph
Quina, Andre
Moesel, Chris
Hall, Dylan
Duffett, Carlton
Dube, Kudakwashe
Gallagher, Thomas
McLachlan, Scott
Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record
title Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record
title_full Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record
title_fullStr Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record
title_full_unstemmed Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record
title_short Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record
title_sort synthea: an approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record
topic Research and Applications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7651916/
https://www.ncbi.nlm.nih.gov/pubmed/29025144
http://dx.doi.org/10.1093/jamia/ocx079
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