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Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record
OBJECTIVE: Our objective is to create a source of synthetic electronic health records that is readily available; suited to industrial, innovation, research, and educational uses; and free of legal, privacy, security, and intellectual property restrictions. MATERIALS AND METHODS: We developed Synthea...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7651916/ https://www.ncbi.nlm.nih.gov/pubmed/29025144 http://dx.doi.org/10.1093/jamia/ocx079 |
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author | Walonoski, Jason Kramer, Mark Nichols, Joseph Quina, Andre Moesel, Chris Hall, Dylan Duffett, Carlton Dube, Kudakwashe Gallagher, Thomas McLachlan, Scott |
author_facet | Walonoski, Jason Kramer, Mark Nichols, Joseph Quina, Andre Moesel, Chris Hall, Dylan Duffett, Carlton Dube, Kudakwashe Gallagher, Thomas McLachlan, Scott |
author_sort | Walonoski, Jason |
collection | PubMed |
description | OBJECTIVE: Our objective is to create a source of synthetic electronic health records that is readily available; suited to industrial, innovation, research, and educational uses; and free of legal, privacy, security, and intellectual property restrictions. MATERIALS AND METHODS: We developed Synthea, an open-source software package that simulates the lifespans of synthetic patients, modeling the 10 most frequent reasons for primary care encounters and the 10 chronic conditions with the highest morbidity in the United States. RESULTS: Synthea adheres to a previously developed conceptual framework, scales via open-source deployment on the Internet, and may be extended with additional disease and treatment modules developed by its user community. One million synthetic patient records are now freely available online, encoded in standard formats (eg, Health Level-7 [HL7] Fast Healthcare Interoperability Resources [FHIR] and Consolidated-Clinical Document Architecture), and accessible through an HL7 FHIR application program interface. DISCUSSION: Health care lags other industries in information technology, data exchange, and interoperability. The lack of freely distributable health records has long hindered innovation in health care. Approaches and tools are available to inexpensively generate synthetic health records at scale without accidental disclosure risk, lowering current barriers to entry for promising early-stage developments. By engaging a growing community of users, the synthetic data generated will become increasingly comprehensive, detailed, and realistic over time. CONCLUSION: Synthetic patients can be simulated with models of disease progression and corresponding standards of care to produce risk-free realistic synthetic health care records at scale. |
format | Online Article Text |
id | pubmed-7651916 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-76519162020-11-30 Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record Walonoski, Jason Kramer, Mark Nichols, Joseph Quina, Andre Moesel, Chris Hall, Dylan Duffett, Carlton Dube, Kudakwashe Gallagher, Thomas McLachlan, Scott J Am Med Inform Assoc Research and Applications OBJECTIVE: Our objective is to create a source of synthetic electronic health records that is readily available; suited to industrial, innovation, research, and educational uses; and free of legal, privacy, security, and intellectual property restrictions. MATERIALS AND METHODS: We developed Synthea, an open-source software package that simulates the lifespans of synthetic patients, modeling the 10 most frequent reasons for primary care encounters and the 10 chronic conditions with the highest morbidity in the United States. RESULTS: Synthea adheres to a previously developed conceptual framework, scales via open-source deployment on the Internet, and may be extended with additional disease and treatment modules developed by its user community. One million synthetic patient records are now freely available online, encoded in standard formats (eg, Health Level-7 [HL7] Fast Healthcare Interoperability Resources [FHIR] and Consolidated-Clinical Document Architecture), and accessible through an HL7 FHIR application program interface. DISCUSSION: Health care lags other industries in information technology, data exchange, and interoperability. The lack of freely distributable health records has long hindered innovation in health care. Approaches and tools are available to inexpensively generate synthetic health records at scale without accidental disclosure risk, lowering current barriers to entry for promising early-stage developments. By engaging a growing community of users, the synthetic data generated will become increasingly comprehensive, detailed, and realistic over time. CONCLUSION: Synthetic patients can be simulated with models of disease progression and corresponding standards of care to produce risk-free realistic synthetic health care records at scale. Oxford University Press 2018-03 2017-08-30 /pmc/articles/PMC7651916/ /pubmed/29025144 http://dx.doi.org/10.1093/jamia/ocx079 Text en © The Author 2017. Published by Oxford University Press on behalf of the American Medical Informatics Association. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Research and Applications Walonoski, Jason Kramer, Mark Nichols, Joseph Quina, Andre Moesel, Chris Hall, Dylan Duffett, Carlton Dube, Kudakwashe Gallagher, Thomas McLachlan, Scott Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record |
title | Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record |
title_full | Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record |
title_fullStr | Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record |
title_full_unstemmed | Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record |
title_short | Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record |
title_sort | synthea: an approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record |
topic | Research and Applications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7651916/ https://www.ncbi.nlm.nih.gov/pubmed/29025144 http://dx.doi.org/10.1093/jamia/ocx079 |
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