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Exploring the effect of ritonavir and TMC-310911 on SARS-CoV-2 and SARS-CoV main proteases: potential from a molecular perspective

AIM: As coronavirus (CoV) disease 2019-associated pneumonia spreads globally, there has been an urgent need to combat the spread and develop vaccines. MATERIALS & METHODS: We used an integrated computational algorithm to explore the binding mechanism of TMC-310911/ritonavir (RVT) with SARS-CoV-2...

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Autores principales: Soremekun, Opeyemi S, Omolabi, Kehinde F, Adewumi, Adeniyi T, Soliman, Mahmoud ES
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Future Science Ltd 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7651988/
https://www.ncbi.nlm.nih.gov/pubmed/33432269
http://dx.doi.org/10.2144/fsoa-2020-0079
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author Soremekun, Opeyemi S
Omolabi, Kehinde F
Adewumi, Adeniyi T
Soliman, Mahmoud ES
author_facet Soremekun, Opeyemi S
Omolabi, Kehinde F
Adewumi, Adeniyi T
Soliman, Mahmoud ES
author_sort Soremekun, Opeyemi S
collection PubMed
description AIM: As coronavirus (CoV) disease 2019-associated pneumonia spreads globally, there has been an urgent need to combat the spread and develop vaccines. MATERIALS & METHODS: We used an integrated computational algorithm to explore the binding mechanism of TMC-310911/ritonavir (RVT) with SARS-CoV-2 and SARS-CoV main proteases. RESULTS: RVT and TMC-310911 had favorable interactions with the proteases, and these high interactions are facilitated by some significant residues such as Asn133, Gly195 and Gln192. Our study further implicated two important rings in the structure of RVT as a possible chemical culprit in its therapeutic activity. CONCLUSION: Although there are conflicting clinical results on the therapeutic potency of RVT in the treatment of coronavirus disease 2019, our findings provided molecular insight into the binding mechanism of TMC-310911 and RVT with SARS-CoV-2 and SARS-CoV main proteases.
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spelling pubmed-76519882020-11-09 Exploring the effect of ritonavir and TMC-310911 on SARS-CoV-2 and SARS-CoV main proteases: potential from a molecular perspective Soremekun, Opeyemi S Omolabi, Kehinde F Adewumi, Adeniyi T Soliman, Mahmoud ES Future Sci OA Research Article AIM: As coronavirus (CoV) disease 2019-associated pneumonia spreads globally, there has been an urgent need to combat the spread and develop vaccines. MATERIALS & METHODS: We used an integrated computational algorithm to explore the binding mechanism of TMC-310911/ritonavir (RVT) with SARS-CoV-2 and SARS-CoV main proteases. RESULTS: RVT and TMC-310911 had favorable interactions with the proteases, and these high interactions are facilitated by some significant residues such as Asn133, Gly195 and Gln192. Our study further implicated two important rings in the structure of RVT as a possible chemical culprit in its therapeutic activity. CONCLUSION: Although there are conflicting clinical results on the therapeutic potency of RVT in the treatment of coronavirus disease 2019, our findings provided molecular insight into the binding mechanism of TMC-310911 and RVT with SARS-CoV-2 and SARS-CoV main proteases. Future Science Ltd 2020-11-09 /pmc/articles/PMC7651988/ /pubmed/33432269 http://dx.doi.org/10.2144/fsoa-2020-0079 Text en © 2020 University of Kwazulu Natal This work is licensed under the Creative Commons Attribution 4.0 License (http://creativecommons.org/licenses/by/4.0/)
spellingShingle Research Article
Soremekun, Opeyemi S
Omolabi, Kehinde F
Adewumi, Adeniyi T
Soliman, Mahmoud ES
Exploring the effect of ritonavir and TMC-310911 on SARS-CoV-2 and SARS-CoV main proteases: potential from a molecular perspective
title Exploring the effect of ritonavir and TMC-310911 on SARS-CoV-2 and SARS-CoV main proteases: potential from a molecular perspective
title_full Exploring the effect of ritonavir and TMC-310911 on SARS-CoV-2 and SARS-CoV main proteases: potential from a molecular perspective
title_fullStr Exploring the effect of ritonavir and TMC-310911 on SARS-CoV-2 and SARS-CoV main proteases: potential from a molecular perspective
title_full_unstemmed Exploring the effect of ritonavir and TMC-310911 on SARS-CoV-2 and SARS-CoV main proteases: potential from a molecular perspective
title_short Exploring the effect of ritonavir and TMC-310911 on SARS-CoV-2 and SARS-CoV main proteases: potential from a molecular perspective
title_sort exploring the effect of ritonavir and tmc-310911 on sars-cov-2 and sars-cov main proteases: potential from a molecular perspective
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7651988/
https://www.ncbi.nlm.nih.gov/pubmed/33432269
http://dx.doi.org/10.2144/fsoa-2020-0079
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