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Isoprenoid-chained lipid EROCOC(17+4): a new matrix for membrane protein crystallization and a crystal delivery medium in serial femtosecond crystallography

In meso crystallization of membrane proteins relies on the use of lipids capable of forming a lipidic cubic phase (LCP). However, almost all previous crystallization trials have used monoacylglycerols, with 1-(cis-9-octadecanoyl)-rac-glycerol (MO) being the most widely used lipid. We now report that...

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Detalles Bibliográficos
Autores principales: Ihara, Kentaro, Hato, Masakatsu, Nakane, Takanori, Yamashita, Keitaro, Kimura-Someya, Tomomi, Hosaka, Toshiaki, Ishizuka-Katsura, Yoshiko, Tanaka, Rie, Tanaka, Tomoyuki, Sugahara, Michihiro, Hirata, Kunio, Yamamoto, Masaki, Nureki, Osamu, Tono, Kensuke, Nango, Eriko, Iwata, So, Shirouzu, Mikako
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7652841/
https://www.ncbi.nlm.nih.gov/pubmed/33168855
http://dx.doi.org/10.1038/s41598-020-76277-x
Descripción
Sumario:In meso crystallization of membrane proteins relies on the use of lipids capable of forming a lipidic cubic phase (LCP). However, almost all previous crystallization trials have used monoacylglycerols, with 1-(cis-9-octadecanoyl)-rac-glycerol (MO) being the most widely used lipid. We now report that EROCOC(17+4) mixed with 10% (w/w) cholesterol (Fig. 1) serves as a new matrix for crystallization and a crystal delivery medium in the serial femtosecond crystallography of Adenosine A(2A) receptor (A(2A)R). The structures of EROCOC(17+4)-matrix grown A(2A)R crystals were determined at 2.0 Å resolution by serial synchrotron rotation crystallography at a cryogenic temperature, and at 1.8 Å by LCP-serial femtosecond crystallography, using an X-ray free-electron laser at 4 and 20 °C sample temperatures, and are comparable to the structure of the MO-matrix grown A(2A)R crystal (PDB ID: 4EIY). Moreover, X-ray scattering measurements indicated that the EROCOC(17+4)/water system did not form the crystalline L(C) phase at least down to − 20 °C, in marked contrast to the equilibrium MO/water system, which transforms into the crystalline L(C) phase below about 17 °C. As the L(C) phase formation within the LCP-matrix causes difficulties in protein crystallography experiments in meso, this feature of EROCOC(17+4) will expand the utility of the in meso method.