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A general mathematical method for predicting spatio-temporal correlations emerging from agent-based models
Agent-based models are used to study complex phenomena in many fields of science. While simulating agent-based models is often straightforward, predicting their behaviour mathematically has remained a key challenge. Recently developed mathematical methods allow the prediction of the emerging spatial...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7653394/ https://www.ncbi.nlm.nih.gov/pubmed/33109018 http://dx.doi.org/10.1098/rsif.2020.0655 |
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author | Ovaskainen, Otso Somervuo, Panu Finkelshtein, Dmitri |
author_facet | Ovaskainen, Otso Somervuo, Panu Finkelshtein, Dmitri |
author_sort | Ovaskainen, Otso |
collection | PubMed |
description | Agent-based models are used to study complex phenomena in many fields of science. While simulating agent-based models is often straightforward, predicting their behaviour mathematically has remained a key challenge. Recently developed mathematical methods allow the prediction of the emerging spatial patterns for a general class of agent-based models, whereas the prediction of spatio-temporal pattern has been thus far achieved only for special cases. We present a general and mathematically rigorous methodology that allows deriving the spatio-temporal correlation structure for a general class of individual-based models. To do so, we define an auxiliary model, in which each agent type of the primary model expands to three types, called the original, the past and the new agents. In this way, the auxiliary model keeps track of both the initial and current state of the primary model, and hence the spatio-temporal correlations of the primary model can be derived from the spatial correlations of the auxiliary model. We illustrate the agreement between analytical predictions and agent-based simulations using two example models from theoretical ecology. In particular, we show that the methodology is able to correctly predict the dynamical behaviour of a host–parasite model that shows spatially localized oscillations. |
format | Online Article Text |
id | pubmed-7653394 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-76533942020-11-17 A general mathematical method for predicting spatio-temporal correlations emerging from agent-based models Ovaskainen, Otso Somervuo, Panu Finkelshtein, Dmitri J R Soc Interface Life Sciences–Mathematics interface Agent-based models are used to study complex phenomena in many fields of science. While simulating agent-based models is often straightforward, predicting their behaviour mathematically has remained a key challenge. Recently developed mathematical methods allow the prediction of the emerging spatial patterns for a general class of agent-based models, whereas the prediction of spatio-temporal pattern has been thus far achieved only for special cases. We present a general and mathematically rigorous methodology that allows deriving the spatio-temporal correlation structure for a general class of individual-based models. To do so, we define an auxiliary model, in which each agent type of the primary model expands to three types, called the original, the past and the new agents. In this way, the auxiliary model keeps track of both the initial and current state of the primary model, and hence the spatio-temporal correlations of the primary model can be derived from the spatial correlations of the auxiliary model. We illustrate the agreement between analytical predictions and agent-based simulations using two example models from theoretical ecology. In particular, we show that the methodology is able to correctly predict the dynamical behaviour of a host–parasite model that shows spatially localized oscillations. The Royal Society 2020-10 2020-10-28 /pmc/articles/PMC7653394/ /pubmed/33109018 http://dx.doi.org/10.1098/rsif.2020.0655 Text en © 2020 The Authors. http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Life Sciences–Mathematics interface Ovaskainen, Otso Somervuo, Panu Finkelshtein, Dmitri A general mathematical method for predicting spatio-temporal correlations emerging from agent-based models |
title | A general mathematical method for predicting spatio-temporal correlations emerging from agent-based models |
title_full | A general mathematical method for predicting spatio-temporal correlations emerging from agent-based models |
title_fullStr | A general mathematical method for predicting spatio-temporal correlations emerging from agent-based models |
title_full_unstemmed | A general mathematical method for predicting spatio-temporal correlations emerging from agent-based models |
title_short | A general mathematical method for predicting spatio-temporal correlations emerging from agent-based models |
title_sort | general mathematical method for predicting spatio-temporal correlations emerging from agent-based models |
topic | Life Sciences–Mathematics interface |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7653394/ https://www.ncbi.nlm.nih.gov/pubmed/33109018 http://dx.doi.org/10.1098/rsif.2020.0655 |
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