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Comparative chromosomal mapping of microsatellite repeats reveals divergent patterns of accumulation in 12 Siluridae (Teleostei: Siluriformes) species

The freshwater family Siluridae occurs in Eurasia and is especially speciose in South and Southeast Asia, representing an important aquaculture and fishery targets. However, despite the restricted cytogenetic data, a high diploid number variation (from 2n=40 to 92) characterizes this fish group. Con...

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Autores principales: Ditcharoen, Sukhonthip, Sassi, Francisco de Menezes Cavalcante, Bertollo, Luiz Antonio Carlos, Molina, Wagner Franco, Liehr, Thomas, Saenjundaeng, Pasakorn, Tanomtong, Alongklod, Supiwong, Weerayuth, Suwannapoom, Chatmongkon, Cioffi, Marcelo de Bello
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7654372/
https://www.ncbi.nlm.nih.gov/pubmed/33156890
http://dx.doi.org/10.1590/1678-4685-GMB-2020-0091
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author Ditcharoen, Sukhonthip
Sassi, Francisco de Menezes Cavalcante
Bertollo, Luiz Antonio Carlos
Molina, Wagner Franco
Liehr, Thomas
Saenjundaeng, Pasakorn
Tanomtong, Alongklod
Supiwong, Weerayuth
Suwannapoom, Chatmongkon
Cioffi, Marcelo de Bello
author_facet Ditcharoen, Sukhonthip
Sassi, Francisco de Menezes Cavalcante
Bertollo, Luiz Antonio Carlos
Molina, Wagner Franco
Liehr, Thomas
Saenjundaeng, Pasakorn
Tanomtong, Alongklod
Supiwong, Weerayuth
Suwannapoom, Chatmongkon
Cioffi, Marcelo de Bello
author_sort Ditcharoen, Sukhonthip
collection PubMed
description The freshwater family Siluridae occurs in Eurasia and is especially speciose in South and Southeast Asia, representing an important aquaculture and fishery targets. However, despite the restricted cytogenetic data, a high diploid number variation (from 2n=40 to 92) characterizes this fish group. Considering the large genomic divergence among its species, silurid genomes have experienced an enormous diversification throughout their evolutionary history. Here, we aim to investigate the chromosomal distribution of several microsatellite repeats in 12 Siluridae species and infer about their possible roles in the karyotype evolution that occurred in this group. Our results indicate divergent patterns of microsatellite distribution and accumulation among the analyzed species. Indeed, they are especially present in significant chromosome locations, such as the centromeric and telomeric regions, precisely the ones associated with several kinds of chromosomal rearrangements. Our data provide pieces of evidence that repetitive DNAs played a direct role in fostering the chromosomal differentiation and biodiversity in this fish family.
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spelling pubmed-76543722020-11-19 Comparative chromosomal mapping of microsatellite repeats reveals divergent patterns of accumulation in 12 Siluridae (Teleostei: Siluriformes) species Ditcharoen, Sukhonthip Sassi, Francisco de Menezes Cavalcante Bertollo, Luiz Antonio Carlos Molina, Wagner Franco Liehr, Thomas Saenjundaeng, Pasakorn Tanomtong, Alongklod Supiwong, Weerayuth Suwannapoom, Chatmongkon Cioffi, Marcelo de Bello Genet Mol Biol Animal Genetics The freshwater family Siluridae occurs in Eurasia and is especially speciose in South and Southeast Asia, representing an important aquaculture and fishery targets. However, despite the restricted cytogenetic data, a high diploid number variation (from 2n=40 to 92) characterizes this fish group. Considering the large genomic divergence among its species, silurid genomes have experienced an enormous diversification throughout their evolutionary history. Here, we aim to investigate the chromosomal distribution of several microsatellite repeats in 12 Siluridae species and infer about their possible roles in the karyotype evolution that occurred in this group. Our results indicate divergent patterns of microsatellite distribution and accumulation among the analyzed species. Indeed, they are especially present in significant chromosome locations, such as the centromeric and telomeric regions, precisely the ones associated with several kinds of chromosomal rearrangements. Our data provide pieces of evidence that repetitive DNAs played a direct role in fostering the chromosomal differentiation and biodiversity in this fish family. Sociedade Brasileira de Genética 2020-11-06 /pmc/articles/PMC7654372/ /pubmed/33156890 http://dx.doi.org/10.1590/1678-4685-GMB-2020-0091 Text en Copyright © 2020, Sociedade Brasileira de Genética. https://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited.
spellingShingle Animal Genetics
Ditcharoen, Sukhonthip
Sassi, Francisco de Menezes Cavalcante
Bertollo, Luiz Antonio Carlos
Molina, Wagner Franco
Liehr, Thomas
Saenjundaeng, Pasakorn
Tanomtong, Alongklod
Supiwong, Weerayuth
Suwannapoom, Chatmongkon
Cioffi, Marcelo de Bello
Comparative chromosomal mapping of microsatellite repeats reveals divergent patterns of accumulation in 12 Siluridae (Teleostei: Siluriformes) species
title Comparative chromosomal mapping of microsatellite repeats reveals divergent patterns of accumulation in 12 Siluridae (Teleostei: Siluriformes) species
title_full Comparative chromosomal mapping of microsatellite repeats reveals divergent patterns of accumulation in 12 Siluridae (Teleostei: Siluriformes) species
title_fullStr Comparative chromosomal mapping of microsatellite repeats reveals divergent patterns of accumulation in 12 Siluridae (Teleostei: Siluriformes) species
title_full_unstemmed Comparative chromosomal mapping of microsatellite repeats reveals divergent patterns of accumulation in 12 Siluridae (Teleostei: Siluriformes) species
title_short Comparative chromosomal mapping of microsatellite repeats reveals divergent patterns of accumulation in 12 Siluridae (Teleostei: Siluriformes) species
title_sort comparative chromosomal mapping of microsatellite repeats reveals divergent patterns of accumulation in 12 siluridae (teleostei: siluriformes) species
topic Animal Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7654372/
https://www.ncbi.nlm.nih.gov/pubmed/33156890
http://dx.doi.org/10.1590/1678-4685-GMB-2020-0091
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