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The complete mitochondrial genome analysis and phylogenetic position of the short barbeled grunter Hapalogenys nigripinnis (Lobotiformes: Hapalogenyidae) from Jeju island, Korea

This study analyzed the complete mitochondrial genome of the short barbeled grunter Hapalogenys nigripinnis (Accession number: MT374064). The complete mitogenome was 16,476 bp long and included 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and a control region. Nucleotide co...

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Autores principales: Ji, Seung-Chul, Kim, Jae-Hoon, Jung, Min-Hwan, Kim, Jung-Hyun, Kim, Hyo-Won, Kim, Moo-Sang, Myeong, Jeong-In, Kim, Dae-Jung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7655029/
https://www.ncbi.nlm.nih.gov/pubmed/33367068
http://dx.doi.org/10.1080/23802359.2020.1831982
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author Ji, Seung-Chul
Kim, Jae-Hoon
Jung, Min-Hwan
Kim, Jung-Hyun
Kim, Hyo-Won
Kim, Moo-Sang
Myeong, Jeong-In
Kim, Dae-Jung
author_facet Ji, Seung-Chul
Kim, Jae-Hoon
Jung, Min-Hwan
Kim, Jung-Hyun
Kim, Hyo-Won
Kim, Moo-Sang
Myeong, Jeong-In
Kim, Dae-Jung
author_sort Ji, Seung-Chul
collection PubMed
description This study analyzed the complete mitochondrial genome of the short barbeled grunter Hapalogenys nigripinnis (Accession number: MT374064). The complete mitogenome was 16,476 bp long and included 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and a control region. Nucleotide composition of the genome was A: 28.70%, T:27.46%, G: 15.73%, and C: 28.11%. All genes were encoded on the H-strand, except for the NADH dehydrogenase subunit (ND6) and 8 tRNA genes. When compared this sequence with the mitogenome of Chinese black grunt, Korean short barbeled grunter showed difference of 64 bp of nucleotide sequence in 20 genes. Phylogenetic tree was constructed using the neighbor-joining (NJ) method and showed the phylogenetic position of the short barbeled grunter in Korea.
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spelling pubmed-76550292020-12-22 The complete mitochondrial genome analysis and phylogenetic position of the short barbeled grunter Hapalogenys nigripinnis (Lobotiformes: Hapalogenyidae) from Jeju island, Korea Ji, Seung-Chul Kim, Jae-Hoon Jung, Min-Hwan Kim, Jung-Hyun Kim, Hyo-Won Kim, Moo-Sang Myeong, Jeong-In Kim, Dae-Jung Mitochondrial DNA B Resour Mitogenome Announcement This study analyzed the complete mitochondrial genome of the short barbeled grunter Hapalogenys nigripinnis (Accession number: MT374064). The complete mitogenome was 16,476 bp long and included 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and a control region. Nucleotide composition of the genome was A: 28.70%, T:27.46%, G: 15.73%, and C: 28.11%. All genes were encoded on the H-strand, except for the NADH dehydrogenase subunit (ND6) and 8 tRNA genes. When compared this sequence with the mitogenome of Chinese black grunt, Korean short barbeled grunter showed difference of 64 bp of nucleotide sequence in 20 genes. Phylogenetic tree was constructed using the neighbor-joining (NJ) method and showed the phylogenetic position of the short barbeled grunter in Korea. Taylor & Francis 2020-11-06 /pmc/articles/PMC7655029/ /pubmed/33367068 http://dx.doi.org/10.1080/23802359.2020.1831982 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ji, Seung-Chul
Kim, Jae-Hoon
Jung, Min-Hwan
Kim, Jung-Hyun
Kim, Hyo-Won
Kim, Moo-Sang
Myeong, Jeong-In
Kim, Dae-Jung
The complete mitochondrial genome analysis and phylogenetic position of the short barbeled grunter Hapalogenys nigripinnis (Lobotiformes: Hapalogenyidae) from Jeju island, Korea
title The complete mitochondrial genome analysis and phylogenetic position of the short barbeled grunter Hapalogenys nigripinnis (Lobotiformes: Hapalogenyidae) from Jeju island, Korea
title_full The complete mitochondrial genome analysis and phylogenetic position of the short barbeled grunter Hapalogenys nigripinnis (Lobotiformes: Hapalogenyidae) from Jeju island, Korea
title_fullStr The complete mitochondrial genome analysis and phylogenetic position of the short barbeled grunter Hapalogenys nigripinnis (Lobotiformes: Hapalogenyidae) from Jeju island, Korea
title_full_unstemmed The complete mitochondrial genome analysis and phylogenetic position of the short barbeled grunter Hapalogenys nigripinnis (Lobotiformes: Hapalogenyidae) from Jeju island, Korea
title_short The complete mitochondrial genome analysis and phylogenetic position of the short barbeled grunter Hapalogenys nigripinnis (Lobotiformes: Hapalogenyidae) from Jeju island, Korea
title_sort complete mitochondrial genome analysis and phylogenetic position of the short barbeled grunter hapalogenys nigripinnis (lobotiformes: hapalogenyidae) from jeju island, korea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7655029/
https://www.ncbi.nlm.nih.gov/pubmed/33367068
http://dx.doi.org/10.1080/23802359.2020.1831982
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