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miR-550a-5p Functions as a Tumor Promoter by Targeting LIMD1 in Lung Adenocarcinoma

Lung adenocarcinoma accounts for half of all lung cancer cases in most countries. Mounting evidence has demonstrated that microRNAs play important roles in cancer progression, and some of them can be identified as potential biomarkers. This study aimed to explore the role of miR-550a-5p, a lung aden...

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Autores principales: Guo, Zi-Zhang, Ma, Zi-Jian, He, Yao-Zhou, Jiang, Wei, Xia, Yang, Pan, Chun-Feng, Wei, Ke, Shi, Yi-Jun, Chen, Liang, Chen, Yi-Jiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7655921/
https://www.ncbi.nlm.nih.gov/pubmed/33194664
http://dx.doi.org/10.3389/fonc.2020.570733
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author Guo, Zi-Zhang
Ma, Zi-Jian
He, Yao-Zhou
Jiang, Wei
Xia, Yang
Pan, Chun-Feng
Wei, Ke
Shi, Yi-Jun
Chen, Liang
Chen, Yi-Jiang
author_facet Guo, Zi-Zhang
Ma, Zi-Jian
He, Yao-Zhou
Jiang, Wei
Xia, Yang
Pan, Chun-Feng
Wei, Ke
Shi, Yi-Jun
Chen, Liang
Chen, Yi-Jiang
author_sort Guo, Zi-Zhang
collection PubMed
description Lung adenocarcinoma accounts for half of all lung cancer cases in most countries. Mounting evidence has demonstrated that microRNAs play important roles in cancer progression, and some of them can be identified as potential biomarkers. This study aimed to explore the role of miR-550a-5p, a lung adenocarcinoma-associated mature microRNA screened out from the TCGA database via R-studio and Perl, with abundant expression in samples and with 5-year survival prognosis difference, as well as having not been studied in lung cancer yet. Potential target genes were predicted by the online database. Gene ontology enrichment, pathway enrichment, protein–protein interaction network, and hub genes–microRNA network were constructed by FunRich, STRING database, and Cytoscape. Then, LIMD1, a known tumor suppressor gene reported by multiple articles, was found to have a negative correlation with miR-550a-5p. The expression of miR-550a-5p was up-regulated in tumor samples and tumor-associated cell lines. Its high expression was also correlated with tumor size. Cell line A549 treated with miR-550a-5p overexpression promoted tumor proliferation, while H1299 treated with miR-550a-5p knockdown showed the opposite result. Mechanically, miR-550a-5p negatively regulated LIMD1 by directly binding to its 3′-UTR validated by dual luciferase assay. In summary, a new potential prognostic and therapeutic biomarker, miR-550a-5p, has been identified by bioinformatics analysis and experimental validation in vitro and in vivo, which promotes lung adenocarcinoma by silencing a known suppressor oncogene LIMD1.
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spelling pubmed-76559212020-11-13 miR-550a-5p Functions as a Tumor Promoter by Targeting LIMD1 in Lung Adenocarcinoma Guo, Zi-Zhang Ma, Zi-Jian He, Yao-Zhou Jiang, Wei Xia, Yang Pan, Chun-Feng Wei, Ke Shi, Yi-Jun Chen, Liang Chen, Yi-Jiang Front Oncol Oncology Lung adenocarcinoma accounts for half of all lung cancer cases in most countries. Mounting evidence has demonstrated that microRNAs play important roles in cancer progression, and some of them can be identified as potential biomarkers. This study aimed to explore the role of miR-550a-5p, a lung adenocarcinoma-associated mature microRNA screened out from the TCGA database via R-studio and Perl, with abundant expression in samples and with 5-year survival prognosis difference, as well as having not been studied in lung cancer yet. Potential target genes were predicted by the online database. Gene ontology enrichment, pathway enrichment, protein–protein interaction network, and hub genes–microRNA network were constructed by FunRich, STRING database, and Cytoscape. Then, LIMD1, a known tumor suppressor gene reported by multiple articles, was found to have a negative correlation with miR-550a-5p. The expression of miR-550a-5p was up-regulated in tumor samples and tumor-associated cell lines. Its high expression was also correlated with tumor size. Cell line A549 treated with miR-550a-5p overexpression promoted tumor proliferation, while H1299 treated with miR-550a-5p knockdown showed the opposite result. Mechanically, miR-550a-5p negatively regulated LIMD1 by directly binding to its 3′-UTR validated by dual luciferase assay. In summary, a new potential prognostic and therapeutic biomarker, miR-550a-5p, has been identified by bioinformatics analysis and experimental validation in vitro and in vivo, which promotes lung adenocarcinoma by silencing a known suppressor oncogene LIMD1. Frontiers Media S.A. 2020-10-28 /pmc/articles/PMC7655921/ /pubmed/33194664 http://dx.doi.org/10.3389/fonc.2020.570733 Text en Copyright © 2020 Guo, Ma, He, Jiang, Xia, Pan, Wei, Shi, Chen and Chen. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Guo, Zi-Zhang
Ma, Zi-Jian
He, Yao-Zhou
Jiang, Wei
Xia, Yang
Pan, Chun-Feng
Wei, Ke
Shi, Yi-Jun
Chen, Liang
Chen, Yi-Jiang
miR-550a-5p Functions as a Tumor Promoter by Targeting LIMD1 in Lung Adenocarcinoma
title miR-550a-5p Functions as a Tumor Promoter by Targeting LIMD1 in Lung Adenocarcinoma
title_full miR-550a-5p Functions as a Tumor Promoter by Targeting LIMD1 in Lung Adenocarcinoma
title_fullStr miR-550a-5p Functions as a Tumor Promoter by Targeting LIMD1 in Lung Adenocarcinoma
title_full_unstemmed miR-550a-5p Functions as a Tumor Promoter by Targeting LIMD1 in Lung Adenocarcinoma
title_short miR-550a-5p Functions as a Tumor Promoter by Targeting LIMD1 in Lung Adenocarcinoma
title_sort mir-550a-5p functions as a tumor promoter by targeting limd1 in lung adenocarcinoma
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7655921/
https://www.ncbi.nlm.nih.gov/pubmed/33194664
http://dx.doi.org/10.3389/fonc.2020.570733
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