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Redox-informed models of global biogeochemical cycles
Microbial activity mediates the fluxes of greenhouse gases. However, in the global models of the marine and terrestrial biospheres used for climate change projections, typically only photosynthetic microbial activity is resolved mechanistically. To move forward, we argue that global biogeochemical m...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7656242/ https://www.ncbi.nlm.nih.gov/pubmed/33173062 http://dx.doi.org/10.1038/s41467-020-19454-w |
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author | Zakem, Emily J. Polz, Martin F. Follows, Michael J. |
author_facet | Zakem, Emily J. Polz, Martin F. Follows, Michael J. |
author_sort | Zakem, Emily J. |
collection | PubMed |
description | Microbial activity mediates the fluxes of greenhouse gases. However, in the global models of the marine and terrestrial biospheres used for climate change projections, typically only photosynthetic microbial activity is resolved mechanistically. To move forward, we argue that global biogeochemical models need a theoretically grounded framework with which to constrain parameterizations of diverse microbial metabolisms. Here, we explain how the key redox chemistry underlying metabolisms provides a path towards this goal. Using this first-principles approach, the presence or absence of metabolic functional types emerges dynamically from ecological interactions, expanding model applicability to unobserved environments. “Nothing is less real than realism. It is only by selection, by elimination, by emphasis, that we get at the real meaning of things.” –Georgia O’Keefe |
format | Online Article Text |
id | pubmed-7656242 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-76562422020-11-12 Redox-informed models of global biogeochemical cycles Zakem, Emily J. Polz, Martin F. Follows, Michael J. Nat Commun Perspective Microbial activity mediates the fluxes of greenhouse gases. However, in the global models of the marine and terrestrial biospheres used for climate change projections, typically only photosynthetic microbial activity is resolved mechanistically. To move forward, we argue that global biogeochemical models need a theoretically grounded framework with which to constrain parameterizations of diverse microbial metabolisms. Here, we explain how the key redox chemistry underlying metabolisms provides a path towards this goal. Using this first-principles approach, the presence or absence of metabolic functional types emerges dynamically from ecological interactions, expanding model applicability to unobserved environments. “Nothing is less real than realism. It is only by selection, by elimination, by emphasis, that we get at the real meaning of things.” –Georgia O’Keefe Nature Publishing Group UK 2020-11-10 /pmc/articles/PMC7656242/ /pubmed/33173062 http://dx.doi.org/10.1038/s41467-020-19454-w Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Perspective Zakem, Emily J. Polz, Martin F. Follows, Michael J. Redox-informed models of global biogeochemical cycles |
title | Redox-informed models of global biogeochemical cycles |
title_full | Redox-informed models of global biogeochemical cycles |
title_fullStr | Redox-informed models of global biogeochemical cycles |
title_full_unstemmed | Redox-informed models of global biogeochemical cycles |
title_short | Redox-informed models of global biogeochemical cycles |
title_sort | redox-informed models of global biogeochemical cycles |
topic | Perspective |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7656242/ https://www.ncbi.nlm.nih.gov/pubmed/33173062 http://dx.doi.org/10.1038/s41467-020-19454-w |
work_keys_str_mv | AT zakememilyj redoxinformedmodelsofglobalbiogeochemicalcycles AT polzmartinf redoxinformedmodelsofglobalbiogeochemicalcycles AT followsmichaelj redoxinformedmodelsofglobalbiogeochemicalcycles |