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Applications of compressive sensing in spatial frequency domain imaging
Significance: Spatial frequency domain imaging (SFDI) is an imaging modality that projects spatially modulated light patterns to determine optical property maps for absorption and reduced scattering of biological tissue via a pixel-by-pixel data acquisition and analysis procedure. Compressive sensin...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Society of Photo-Optical Instrumentation Engineers
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7657414/ https://www.ncbi.nlm.nih.gov/pubmed/33179460 http://dx.doi.org/10.1117/1.JBO.25.11.112904 |
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author | Mellors, Ben O. L. Bentley, Alexander Spear, Abigail M. Howle, Christopher R. Dehghani, Hamid |
author_facet | Mellors, Ben O. L. Bentley, Alexander Spear, Abigail M. Howle, Christopher R. Dehghani, Hamid |
author_sort | Mellors, Ben O. L. |
collection | PubMed |
description | Significance: Spatial frequency domain imaging (SFDI) is an imaging modality that projects spatially modulated light patterns to determine optical property maps for absorption and reduced scattering of biological tissue via a pixel-by-pixel data acquisition and analysis procedure. Compressive sensing (CS) is a signal processing methodology which aims to reproduce the original signal with a reduced number of measurements, addressing the pixel-wise nature of SFDI. These methodologies have been combined for complex heterogenous data in both the image detection and data analysis stage in a compressive sensing SFDI (cs-SFDI) approach, showing reduction in both the data acquisition and overall computational time. Aim: Application of CS in SFDI data acquisition and image reconstruction significantly improves data collection and image recovery time without loss of quantitative accuracy. Approach: cs-SFDI has been applied to an increased heterogenic sample from the AppSFDI data set (back of the hand), highlighting the increased number of CS measurements required as compared to simple phantoms to accurately obtain optical property maps. A novel application of CS to the parameter recovery stage of image analysis has also been developed and validated. Results: Dimensionality reduction has been demonstrated using the increased heterogenic sample at both the acquisition and analysis stages. A data reduction of 30% for the cs-SFDI and up to 80% for the parameter recover was achieved as compared to traditional SFDI, while maintaining an error of [Formula: see text] for the recovered optical property maps. Conclusion: The application of data reduction through CS demonstrates additional capabilities for multi- and hyperspectral SFDI, providing advanced optical and physiological property maps. |
format | Online Article Text |
id | pubmed-7657414 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Society of Photo-Optical Instrumentation Engineers |
record_format | MEDLINE/PubMed |
spelling | pubmed-76574142020-11-13 Applications of compressive sensing in spatial frequency domain imaging Mellors, Ben O. L. Bentley, Alexander Spear, Abigail M. Howle, Christopher R. Dehghani, Hamid J Biomed Opt Special Series on Artificial Intelligence and Machine Learning in Biomedical Optics Significance: Spatial frequency domain imaging (SFDI) is an imaging modality that projects spatially modulated light patterns to determine optical property maps for absorption and reduced scattering of biological tissue via a pixel-by-pixel data acquisition and analysis procedure. Compressive sensing (CS) is a signal processing methodology which aims to reproduce the original signal with a reduced number of measurements, addressing the pixel-wise nature of SFDI. These methodologies have been combined for complex heterogenous data in both the image detection and data analysis stage in a compressive sensing SFDI (cs-SFDI) approach, showing reduction in both the data acquisition and overall computational time. Aim: Application of CS in SFDI data acquisition and image reconstruction significantly improves data collection and image recovery time without loss of quantitative accuracy. Approach: cs-SFDI has been applied to an increased heterogenic sample from the AppSFDI data set (back of the hand), highlighting the increased number of CS measurements required as compared to simple phantoms to accurately obtain optical property maps. A novel application of CS to the parameter recovery stage of image analysis has also been developed and validated. Results: Dimensionality reduction has been demonstrated using the increased heterogenic sample at both the acquisition and analysis stages. A data reduction of 30% for the cs-SFDI and up to 80% for the parameter recover was achieved as compared to traditional SFDI, while maintaining an error of [Formula: see text] for the recovered optical property maps. Conclusion: The application of data reduction through CS demonstrates additional capabilities for multi- and hyperspectral SFDI, providing advanced optical and physiological property maps. Society of Photo-Optical Instrumentation Engineers 2020-11-11 2020-11 /pmc/articles/PMC7657414/ /pubmed/33179460 http://dx.doi.org/10.1117/1.JBO.25.11.112904 Text en © 2020 The Authors https://creativecommons.org/licenses/by/4.0/ Published by SPIE under a Creative Commons Attribution 4.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI. |
spellingShingle | Special Series on Artificial Intelligence and Machine Learning in Biomedical Optics Mellors, Ben O. L. Bentley, Alexander Spear, Abigail M. Howle, Christopher R. Dehghani, Hamid Applications of compressive sensing in spatial frequency domain imaging |
title | Applications of compressive sensing in spatial frequency domain imaging |
title_full | Applications of compressive sensing in spatial frequency domain imaging |
title_fullStr | Applications of compressive sensing in spatial frequency domain imaging |
title_full_unstemmed | Applications of compressive sensing in spatial frequency domain imaging |
title_short | Applications of compressive sensing in spatial frequency domain imaging |
title_sort | applications of compressive sensing in spatial frequency domain imaging |
topic | Special Series on Artificial Intelligence and Machine Learning in Biomedical Optics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7657414/ https://www.ncbi.nlm.nih.gov/pubmed/33179460 http://dx.doi.org/10.1117/1.JBO.25.11.112904 |
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