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Bayesian inference for diffusion processes: using higher-order approximations for transition densities
Modelling random dynamical systems in continuous time, diffusion processes are a powerful tool in many areas of science. Model parameters can be estimated from time-discretely observed processes using Markov chain Monte Carlo (MCMC) methods that introduce auxiliary data. These methods typically appr...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7657901/ https://www.ncbi.nlm.nih.gov/pubmed/33204444 http://dx.doi.org/10.1098/rsos.200270 |
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author | Pieschner, Susanne Fuchs, Christiane |
author_facet | Pieschner, Susanne Fuchs, Christiane |
author_sort | Pieschner, Susanne |
collection | PubMed |
description | Modelling random dynamical systems in continuous time, diffusion processes are a powerful tool in many areas of science. Model parameters can be estimated from time-discretely observed processes using Markov chain Monte Carlo (MCMC) methods that introduce auxiliary data. These methods typically approximate the transition densities of the process numerically, both for calculating the posterior densities and proposing auxiliary data. Here, the Euler–Maruyama scheme is the standard approximation technique. However, the MCMC method is computationally expensive. Using higher-order approximations may accelerate it, but the specific implementation and benefit remain unclear. Hence, we investigate the utilization and usefulness of higher-order approximations in the example of the Milstein scheme. Our study demonstrates that the MCMC methods based on the Milstein approximation yield good estimation results. However, they are computationally more expensive and can be applied to multidimensional processes only with impractical restrictions. Moreover, the combination of the Milstein approximation and the well-known modified bridge proposal introduces additional numerical challenges. |
format | Online Article Text |
id | pubmed-7657901 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-76579012020-11-16 Bayesian inference for diffusion processes: using higher-order approximations for transition densities Pieschner, Susanne Fuchs, Christiane R Soc Open Sci Mathematics Modelling random dynamical systems in continuous time, diffusion processes are a powerful tool in many areas of science. Model parameters can be estimated from time-discretely observed processes using Markov chain Monte Carlo (MCMC) methods that introduce auxiliary data. These methods typically approximate the transition densities of the process numerically, both for calculating the posterior densities and proposing auxiliary data. Here, the Euler–Maruyama scheme is the standard approximation technique. However, the MCMC method is computationally expensive. Using higher-order approximations may accelerate it, but the specific implementation and benefit remain unclear. Hence, we investigate the utilization and usefulness of higher-order approximations in the example of the Milstein scheme. Our study demonstrates that the MCMC methods based on the Milstein approximation yield good estimation results. However, they are computationally more expensive and can be applied to multidimensional processes only with impractical restrictions. Moreover, the combination of the Milstein approximation and the well-known modified bridge proposal introduces additional numerical challenges. The Royal Society 2020-10-07 /pmc/articles/PMC7657901/ /pubmed/33204444 http://dx.doi.org/10.1098/rsos.200270 Text en © 2020 The Authors. http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Mathematics Pieschner, Susanne Fuchs, Christiane Bayesian inference for diffusion processes: using higher-order approximations for transition densities |
title | Bayesian inference for diffusion processes: using higher-order approximations for transition densities |
title_full | Bayesian inference for diffusion processes: using higher-order approximations for transition densities |
title_fullStr | Bayesian inference for diffusion processes: using higher-order approximations for transition densities |
title_full_unstemmed | Bayesian inference for diffusion processes: using higher-order approximations for transition densities |
title_short | Bayesian inference for diffusion processes: using higher-order approximations for transition densities |
title_sort | bayesian inference for diffusion processes: using higher-order approximations for transition densities |
topic | Mathematics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7657901/ https://www.ncbi.nlm.nih.gov/pubmed/33204444 http://dx.doi.org/10.1098/rsos.200270 |
work_keys_str_mv | AT pieschnersusanne bayesianinferencefordiffusionprocessesusinghigherorderapproximationsfortransitiondensities AT fuchschristiane bayesianinferencefordiffusionprocessesusinghigherorderapproximationsfortransitiondensities |