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COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images

The Coronavirus Disease 2019 (COVID-19) pandemic continues to have a devastating effect on the health and well-being of the global population. A critical step in the fight against COVID-19 is effective screening of infected patients, with one of the key screening approaches being radiology examinati...

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Autores principales: Wang, Linda, Lin, Zhong Qiu, Wong, Alexander
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7658227/
https://www.ncbi.nlm.nih.gov/pubmed/33177550
http://dx.doi.org/10.1038/s41598-020-76550-z
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author Wang, Linda
Lin, Zhong Qiu
Wong, Alexander
author_facet Wang, Linda
Lin, Zhong Qiu
Wong, Alexander
author_sort Wang, Linda
collection PubMed
description The Coronavirus Disease 2019 (COVID-19) pandemic continues to have a devastating effect on the health and well-being of the global population. A critical step in the fight against COVID-19 is effective screening of infected patients, with one of the key screening approaches being radiology examination using chest radiography. It was found in early studies that patients present abnormalities in chest radiography images that are characteristic of those infected with COVID-19. Motivated by this and inspired by the open source efforts of the research community, in this study we introduce COVID-Net, a deep convolutional neural network design tailored for the detection of COVID-19 cases from chest X-ray (CXR) images that is open source and available to the general public. To the best of the authors’ knowledge, COVID-Net is one of the first open source network designs for COVID-19 detection from CXR images at the time of initial release. We also introduce COVIDx, an open access benchmark dataset that we generated comprising of 13,975 CXR images across 13,870 patient patient cases, with the largest number of publicly available COVID-19 positive cases to the best of the authors’ knowledge. Furthermore, we investigate how COVID-Net makes predictions using an explainability method in an attempt to not only gain deeper insights into critical factors associated with COVID cases, which can aid clinicians in improved screening, but also audit COVID-Net in a responsible and transparent manner to validate that it is making decisions based on relevant information from the CXR images. By no means a production-ready solution, the hope is that the open access COVID-Net, along with the description on constructing the open source COVIDx dataset, will be leveraged and build upon by both researchers and citizen data scientists alike to accelerate the development of highly accurate yet practical deep learning solutions for detecting COVID-19 cases and accelerate treatment of those who need it the most.
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spelling pubmed-76582272020-11-12 COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images Wang, Linda Lin, Zhong Qiu Wong, Alexander Sci Rep Article The Coronavirus Disease 2019 (COVID-19) pandemic continues to have a devastating effect on the health and well-being of the global population. A critical step in the fight against COVID-19 is effective screening of infected patients, with one of the key screening approaches being radiology examination using chest radiography. It was found in early studies that patients present abnormalities in chest radiography images that are characteristic of those infected with COVID-19. Motivated by this and inspired by the open source efforts of the research community, in this study we introduce COVID-Net, a deep convolutional neural network design tailored for the detection of COVID-19 cases from chest X-ray (CXR) images that is open source and available to the general public. To the best of the authors’ knowledge, COVID-Net is one of the first open source network designs for COVID-19 detection from CXR images at the time of initial release. We also introduce COVIDx, an open access benchmark dataset that we generated comprising of 13,975 CXR images across 13,870 patient patient cases, with the largest number of publicly available COVID-19 positive cases to the best of the authors’ knowledge. Furthermore, we investigate how COVID-Net makes predictions using an explainability method in an attempt to not only gain deeper insights into critical factors associated with COVID cases, which can aid clinicians in improved screening, but also audit COVID-Net in a responsible and transparent manner to validate that it is making decisions based on relevant information from the CXR images. By no means a production-ready solution, the hope is that the open access COVID-Net, along with the description on constructing the open source COVIDx dataset, will be leveraged and build upon by both researchers and citizen data scientists alike to accelerate the development of highly accurate yet practical deep learning solutions for detecting COVID-19 cases and accelerate treatment of those who need it the most. Nature Publishing Group UK 2020-11-11 /pmc/articles/PMC7658227/ /pubmed/33177550 http://dx.doi.org/10.1038/s41598-020-76550-z Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Wang, Linda
Lin, Zhong Qiu
Wong, Alexander
COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images
title COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images
title_full COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images
title_fullStr COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images
title_full_unstemmed COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images
title_short COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images
title_sort covid-net: a tailored deep convolutional neural network design for detection of covid-19 cases from chest x-ray images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7658227/
https://www.ncbi.nlm.nih.gov/pubmed/33177550
http://dx.doi.org/10.1038/s41598-020-76550-z
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