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Predictive modeling of proliferative vitreoretinopathy using automated machine learning by ophthalmologists without coding experience
We aimed to assess the feasibility of machine learning (ML) algorithm design to predict proliferative vitreoretinopathy (PVR) by ophthalmologists without coding experience using automated ML (AutoML). The study was a retrospective cohort study of 506 eyes who underwent pars plana vitrectomy for rheg...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7658348/ https://www.ncbi.nlm.nih.gov/pubmed/33177614 http://dx.doi.org/10.1038/s41598-020-76665-3 |
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author | Antaki, Fares Kahwati, Ghofril Sebag, Julia Coussa, Razek Georges Fanous, Anthony Duval, Renaud Sebag, Mikael |
author_facet | Antaki, Fares Kahwati, Ghofril Sebag, Julia Coussa, Razek Georges Fanous, Anthony Duval, Renaud Sebag, Mikael |
author_sort | Antaki, Fares |
collection | PubMed |
description | We aimed to assess the feasibility of machine learning (ML) algorithm design to predict proliferative vitreoretinopathy (PVR) by ophthalmologists without coding experience using automated ML (AutoML). The study was a retrospective cohort study of 506 eyes who underwent pars plana vitrectomy for rhegmatogenous retinal detachment (RRD) by a single surgeon at a tertiary-care hospital between 2012 and 2019. Two ophthalmologists without coding experience used an interactive application in MATLAB to build and evaluate ML algorithms for the prediction of postoperative PVR using clinical data from the electronic health records. The clinical features associated with postoperative PVR were determined by univariate feature selection. The area under the curve (AUC) for predicting postoperative PVR was better for models that included pre-existing PVR as an input. The quadratic support vector machine (SVM) model built using all selected clinical features had an AUC of 0.90, a sensitivity of 63.0%, and a specificity of 97.8%. An optimized Naïve Bayes algorithm that did not include pre-existing PVR as an input feature had an AUC of 0.81, a sensitivity of 54.3%, and a specificity of 92.4%. In conclusion, the development of ML models for the prediction of PVR by ophthalmologists without coding experience is feasible. Input from a data scientist might still be needed to tackle class imbalance—a common challenge in ML classification using real-world clinical data. |
format | Online Article Text |
id | pubmed-7658348 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-76583482020-11-13 Predictive modeling of proliferative vitreoretinopathy using automated machine learning by ophthalmologists without coding experience Antaki, Fares Kahwati, Ghofril Sebag, Julia Coussa, Razek Georges Fanous, Anthony Duval, Renaud Sebag, Mikael Sci Rep Article We aimed to assess the feasibility of machine learning (ML) algorithm design to predict proliferative vitreoretinopathy (PVR) by ophthalmologists without coding experience using automated ML (AutoML). The study was a retrospective cohort study of 506 eyes who underwent pars plana vitrectomy for rhegmatogenous retinal detachment (RRD) by a single surgeon at a tertiary-care hospital between 2012 and 2019. Two ophthalmologists without coding experience used an interactive application in MATLAB to build and evaluate ML algorithms for the prediction of postoperative PVR using clinical data from the electronic health records. The clinical features associated with postoperative PVR were determined by univariate feature selection. The area under the curve (AUC) for predicting postoperative PVR was better for models that included pre-existing PVR as an input. The quadratic support vector machine (SVM) model built using all selected clinical features had an AUC of 0.90, a sensitivity of 63.0%, and a specificity of 97.8%. An optimized Naïve Bayes algorithm that did not include pre-existing PVR as an input feature had an AUC of 0.81, a sensitivity of 54.3%, and a specificity of 92.4%. In conclusion, the development of ML models for the prediction of PVR by ophthalmologists without coding experience is feasible. Input from a data scientist might still be needed to tackle class imbalance—a common challenge in ML classification using real-world clinical data. Nature Publishing Group UK 2020-11-11 /pmc/articles/PMC7658348/ /pubmed/33177614 http://dx.doi.org/10.1038/s41598-020-76665-3 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Antaki, Fares Kahwati, Ghofril Sebag, Julia Coussa, Razek Georges Fanous, Anthony Duval, Renaud Sebag, Mikael Predictive modeling of proliferative vitreoretinopathy using automated machine learning by ophthalmologists without coding experience |
title | Predictive modeling of proliferative vitreoretinopathy using automated machine learning by ophthalmologists without coding experience |
title_full | Predictive modeling of proliferative vitreoretinopathy using automated machine learning by ophthalmologists without coding experience |
title_fullStr | Predictive modeling of proliferative vitreoretinopathy using automated machine learning by ophthalmologists without coding experience |
title_full_unstemmed | Predictive modeling of proliferative vitreoretinopathy using automated machine learning by ophthalmologists without coding experience |
title_short | Predictive modeling of proliferative vitreoretinopathy using automated machine learning by ophthalmologists without coding experience |
title_sort | predictive modeling of proliferative vitreoretinopathy using automated machine learning by ophthalmologists without coding experience |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7658348/ https://www.ncbi.nlm.nih.gov/pubmed/33177614 http://dx.doi.org/10.1038/s41598-020-76665-3 |
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