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Spectral Jaccard Similarity: A New Approach to Estimating Pairwise Sequence Alignments
Pairwise sequence alignment is often a computational bottleneck in genomic analysis pipelines, particularly in the context of third-generation sequencing technologies. To speed up this process, the pairwise k-mer Jaccard similarity is sometimes used as a proxy for alignment size in order to filter p...
| Autores principales: | , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Elsevier
2020
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7660437/ https://www.ncbi.nlm.nih.gov/pubmed/33205128 http://dx.doi.org/10.1016/j.patter.2020.100081 |