Cargando…

Blood group typing from whole-genome sequencing data

Many questions can be explored thanks to whole-genome data. The aim of this study was to overcome their main limits, software availability and database accuracy, and estimate the feasibility of red blood cell (RBC) antigen typing from whole-genome sequencing (WGS) data. We analyzed whole-genome data...

Descripción completa

Detalles Bibliográficos
Autores principales:	Paganini, Julien, Nagy, Peter L., Rouse, Nicholas, Gouret, Philippe, Chiaroni, Jacques, Picard, Chistophe, Di Cristofaro, Julie
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2020
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7660531/ https://www.ncbi.nlm.nih.gov/pubmed/33180819 http://dx.doi.org/10.1371/journal.pone.0242168

Ejemplares similares

HLA-G Haplotypes Are Differentially Associated with Asthmatic Features
por: Ribeyre, Camille, et al.
Publicado: (2018)

Immune diversity sheds light on missing variation in worldwide genetic diversity panels
por: Abi-Rached, Laurent, et al.
Publicado: (2018)

HLA-H: Transcriptional Activity and HLA-E Mobilization
por: Jordier, François, et al.
Publicado: (2020)

Reliable Phylogenetic Trees Building: A New Web Interface for FIGENIX
por: Paganini, Julien, et al.
Publicado: (2012)

Mobilisation of HLA‐F on the surface of bronchial epithelial cells and platelets in asthmatic patients
por: Fiouane, Sabrina, et al.
Publicado: (2022)

GLADX: An Automated Approach to Analyze the Lineage-Specific Loss and Pseudogenization of Genes
por: Dainat, Jacques, et al.
Publicado: (2012)

Bronchial Epithelial Cells from Asthmatic Patients Display Less Functional HLA-G Isoform Expression
por: Carlini, Federico, et al.
Publicado: (2017)

HLA-F and LILRB1 Genetic Polymorphisms Associated with Alloimmunisation in Sickle Cell Disease
por: Bernit, Emmanuelle, et al.
Publicado: (2023)

The Chordate Proteome History Database
por: Levasseur, Anthony, et al.
Publicado: (2012)

HLA-E(⁎)01:03 Allele in Lung Transplant Recipients Correlates with Higher Chronic Lung Allograft Dysfunction Occurrence
por: Di Cristofaro, Julie, et al.
Publicado: (2016)

Association of HLA-A and Non-Classical HLA Class I Alleles
por: Carlini, Federico, et al.
Publicado: (2016)

HLA-G UTR Haplotype Conservation in the Malian Population: Association with Soluble HLA-G
por: Carlini, Federico, et al.
Publicado: (2013)

Revisiting the Diego Blood Group System in Amerindians: Evidence for Gene-Culture Comigration
por: Bégat, Christophe, et al.
Publicado: (2015)

Maternal HLA Ib Polymorphisms in Pregnancy Allo-Immunization
por: Persson, Gry, et al.
Publicado: (2021)

Blood groups of Neandertals and Denisova decrypted
por: Condemi, Silvana, et al.
Publicado: (2021)

Prediction of various blood group systems using Korean whole-genome sequencing data
por: Hyun, Jungwon, et al.
Publicado: (2022)

The genomic landscape of fibrolamellar hepatocellular carcinoma: whole genome sequencing of ten patients
por: Darcy, David G., et al.
Publicado: (2015)

Determination of the phylogenetic origins of the Árpád Dynasty based on Y chromosome sequencing of Béla the Third
por: Nagy, Péter L., et al.
Publicado: (2020)

Genome-wide analysis of Corsican population reveals a close affinity with Northern and Central Italy
por: Tamm, Erika, et al.
Publicado: (2019)

Publisher Correction: Genome-wide analysis of Corsican population reveals a close affinity with Northern and Central Italy
por: Tamm, Erika, et al.
Publicado: (2019)

An automated approach for the identification of horizontal gene transfers from complete genomes reveals the rhizome of Rickettsiales
por: Le, Phuong Thi, et al.
Publicado: (2012)

FCGR3A and FCGR2A Genotypes Differentially Impact Allograft Rejection and Patients' Survival After Lung Transplant
por: Paul, Pascale, et al.
Publicado: (2019)

Contribution of Lateral Gene Transfers to the Genome Composition and Parasitic Ability of Root-Knot Nematodes
por: Paganini, Julien, et al.
Publicado: (2012)

Analysis of a large single institution cohort of related donors fails to detect a relation between SDF1/CXCR4 or VCAM/VLA4 genetic polymorphisms and the level of hematopoietic progenitor cell mobilization in response to G-CSF
por: Garciaz, Sylvain, et al.
Publicado: (2020)

Lower prevalence of antibodies neutralizing SARS-CoV-2 in group O French blood donors
por: Gallian, Pierre, et al.
Publicado: (2020)

The radial expansion of the Diego blood group system polymorphisms in Asia: mark of co-migration with the Mongol conquests
por: Petit, Florence, et al.
Publicado: (2018)

Using whole-genome sequencing to characterize clinically significant blood groups among healthy older Australians
por: Jadhao, Sudhir, et al.
Publicado: (2022)

Prehistoric migrations through the Mediterranean basin shaped Corsican Y-chromosome diversity
por: Di Cristofaro, Julie, et al.
Publicado: (2018)

Y-chromosome phylogeographic analysis of the Greek-Cypriot population reveals elements consistent with Neolithic and Bronze Age settlements
por: Voskarides, Konstantinos, et al.
Publicado: (2016)

New methods for the quantification of mixed chimerism in transplantation
por: Picard, Christophe, et al.
Publicado: (2023)

Sequence variants from whole genome sequencing a large group of Icelanders
por: Gudbjartsson, Daniel F, et al.
Publicado: (2015)

PhyloPattern: regular expressions to identify complex patterns in phylogenetic trees
por: Gouret, Philippe, et al.
Publicado: (2009)

Peptidoglycan: a post-genomic analysis
por: Cayrou, Caroline, et al.
Publicado: (2012)

Correction: peptidoglycan: a post-genomic analysis
por: Cayrou, Caroline, et al.
Publicado: (2014)

Whole-Genome Sequence of Myxococcus Phage Mx9
por: Wielgoss, Sébastien, et al.
Publicado: (2023)

Validation of whole genome sequencing from dried blood spots
por: Agrawal, Pooja, et al.
Publicado: (2021)

Whole-Genome Sequence Data Uncover Widespread Heterothallism in the Largest Group of Lichen-Forming Fungi
por: Pizarro, David, et al.
Publicado: (2019)

Whole genome sequencing of Plasmodium falciparum from dried blood spots using selective whole genome amplification
por: Oyola, Samuel O., et al.
Publicado: (2016)

Identifying and mitigating batch effects in whole genome sequencing data
por: Tom, Jennifer A., et al.
Publicado: (2017)

Whole genome sequencing analysis of Plasmodium vivax using whole genome capture
por: Bright, A Taylor, et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_1qp0kbkvuh2c5qvsajn58a465l