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Unraveling response to temozolomide in preclinical GL261 glioblastoma with MRI/MRSI using radiomics and signal source extraction

Glioblastoma is the most frequent aggressive primary brain tumor amongst human adults. Its standard treatment involves chemotherapy, for which the drug temozolomide is a common choice. These are heterogeneous and variable tumors which might benefit from personalized, data-based therapy strategies, a...

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Autores principales: Núñez, Luis Miguel, Romero, Enrique, Julià-Sapé, Margarida, Ledesma-Carbayo, María Jesús, Santos, Andrés, Arús, Carles, Candiota, Ana Paula, Vellido, Alfredo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7661707/
https://www.ncbi.nlm.nih.gov/pubmed/33184423
http://dx.doi.org/10.1038/s41598-020-76686-y
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author Núñez, Luis Miguel
Romero, Enrique
Julià-Sapé, Margarida
Ledesma-Carbayo, María Jesús
Santos, Andrés
Arús, Carles
Candiota, Ana Paula
Vellido, Alfredo
author_facet Núñez, Luis Miguel
Romero, Enrique
Julià-Sapé, Margarida
Ledesma-Carbayo, María Jesús
Santos, Andrés
Arús, Carles
Candiota, Ana Paula
Vellido, Alfredo
author_sort Núñez, Luis Miguel
collection PubMed
description Glioblastoma is the most frequent aggressive primary brain tumor amongst human adults. Its standard treatment involves chemotherapy, for which the drug temozolomide is a common choice. These are heterogeneous and variable tumors which might benefit from personalized, data-based therapy strategies, and for which there is room for improvement in therapy response follow-up, investigated with preclinical models. This study addresses a preclinical question that involves distinguishing between treated and control (untreated) mice bearing glioblastoma, using machine learning techniques, from magnetic resonance-based data in two modalities: MRI and MRSI. It aims to go beyond the comparison of methods for such discrimination to provide an analytical pipeline that could be used in subsequent human studies. This analytical pipeline is meant to be a usable and interpretable tool for the radiology expert in the hope that such interpretation helps revealing new insights about the problem itself. For that, we propose coupling source extraction-based and radiomics-based data transformations with feature selection. Special attention is paid to the generation of radiologist-friendly visual nosological representations of the analyzed tumors.
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spelling pubmed-76617072020-11-13 Unraveling response to temozolomide in preclinical GL261 glioblastoma with MRI/MRSI using radiomics and signal source extraction Núñez, Luis Miguel Romero, Enrique Julià-Sapé, Margarida Ledesma-Carbayo, María Jesús Santos, Andrés Arús, Carles Candiota, Ana Paula Vellido, Alfredo Sci Rep Article Glioblastoma is the most frequent aggressive primary brain tumor amongst human adults. Its standard treatment involves chemotherapy, for which the drug temozolomide is a common choice. These are heterogeneous and variable tumors which might benefit from personalized, data-based therapy strategies, and for which there is room for improvement in therapy response follow-up, investigated with preclinical models. This study addresses a preclinical question that involves distinguishing between treated and control (untreated) mice bearing glioblastoma, using machine learning techniques, from magnetic resonance-based data in two modalities: MRI and MRSI. It aims to go beyond the comparison of methods for such discrimination to provide an analytical pipeline that could be used in subsequent human studies. This analytical pipeline is meant to be a usable and interpretable tool for the radiology expert in the hope that such interpretation helps revealing new insights about the problem itself. For that, we propose coupling source extraction-based and radiomics-based data transformations with feature selection. Special attention is paid to the generation of radiologist-friendly visual nosological representations of the analyzed tumors. Nature Publishing Group UK 2020-11-12 /pmc/articles/PMC7661707/ /pubmed/33184423 http://dx.doi.org/10.1038/s41598-020-76686-y Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Núñez, Luis Miguel
Romero, Enrique
Julià-Sapé, Margarida
Ledesma-Carbayo, María Jesús
Santos, Andrés
Arús, Carles
Candiota, Ana Paula
Vellido, Alfredo
Unraveling response to temozolomide in preclinical GL261 glioblastoma with MRI/MRSI using radiomics and signal source extraction
title Unraveling response to temozolomide in preclinical GL261 glioblastoma with MRI/MRSI using radiomics and signal source extraction
title_full Unraveling response to temozolomide in preclinical GL261 glioblastoma with MRI/MRSI using radiomics and signal source extraction
title_fullStr Unraveling response to temozolomide in preclinical GL261 glioblastoma with MRI/MRSI using radiomics and signal source extraction
title_full_unstemmed Unraveling response to temozolomide in preclinical GL261 glioblastoma with MRI/MRSI using radiomics and signal source extraction
title_short Unraveling response to temozolomide in preclinical GL261 glioblastoma with MRI/MRSI using radiomics and signal source extraction
title_sort unraveling response to temozolomide in preclinical gl261 glioblastoma with mri/mrsi using radiomics and signal source extraction
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7661707/
https://www.ncbi.nlm.nih.gov/pubmed/33184423
http://dx.doi.org/10.1038/s41598-020-76686-y
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