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Prognostic Value of Genes and Immune Infiltration in Prostate Tumor Microenvironment
BACKGROUND: Prostate cancer (PCa) is one of the most common cancers and the fifth leading cause of cancer-related death in men. Immune responses in the tumor microenvironment are hypothesized to be related to the prognosis of PCa patients; however, no studies are available to confirm the same. In th...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7662134/ https://www.ncbi.nlm.nih.gov/pubmed/33194726 http://dx.doi.org/10.3389/fonc.2020.584055 |
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author | Sun, Wenguo Shi, Hailin Yuan, Zhen Xia, Li Xiang, Xuebao Quan, Xiangfeng Shi, Wenjie Jiang, Leiming |
author_facet | Sun, Wenguo Shi, Hailin Yuan, Zhen Xia, Li Xiang, Xuebao Quan, Xiangfeng Shi, Wenjie Jiang, Leiming |
author_sort | Sun, Wenguo |
collection | PubMed |
description | BACKGROUND: Prostate cancer (PCa) is one of the most common cancers and the fifth leading cause of cancer-related death in men. Immune responses in the tumor microenvironment are hypothesized to be related to the prognosis of PCa patients; however, no studies are available to confirm the same. In this study, we aimed to explore the potential link between these two factors and identify new biomarkers to estimate the survival rate of PCa patients. METHODS: A total of 490 cases were obtained from The Cancer Genome Atlas (TCGA) database. The gene expression data were analyzed by the ESTIMATE algorithm to evaluate the immune and stromal scores. The survival rate was calculated according to the case-specific clinical data. Enrichment analysis was performed to discover the main biological processes and signaling pathways of immune responses. We further identified and analyzed hub genes in the protein-protein interaction (PPI) network and evaluated their prognostic values. RESULTS: Immune score significantly correlated with immune cell infiltration and overall survival of PCa patients. The genes CXCR4 and GPR183, identified as hub genes in the PPI network, correlated with immune cell infiltration and prognosis of PCa patients. CONCLUSION: CXCR4 and GPR183 participate in immune cell infiltration and function in PCa patients. The immune score, as well as the expression of CXCR4 and GPR183 in prostate cancer tissues, could be potential indexes for the prognosis of prostate cancer. |
format | Online Article Text |
id | pubmed-7662134 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-76621342020-11-13 Prognostic Value of Genes and Immune Infiltration in Prostate Tumor Microenvironment Sun, Wenguo Shi, Hailin Yuan, Zhen Xia, Li Xiang, Xuebao Quan, Xiangfeng Shi, Wenjie Jiang, Leiming Front Oncol Oncology BACKGROUND: Prostate cancer (PCa) is one of the most common cancers and the fifth leading cause of cancer-related death in men. Immune responses in the tumor microenvironment are hypothesized to be related to the prognosis of PCa patients; however, no studies are available to confirm the same. In this study, we aimed to explore the potential link between these two factors and identify new biomarkers to estimate the survival rate of PCa patients. METHODS: A total of 490 cases were obtained from The Cancer Genome Atlas (TCGA) database. The gene expression data were analyzed by the ESTIMATE algorithm to evaluate the immune and stromal scores. The survival rate was calculated according to the case-specific clinical data. Enrichment analysis was performed to discover the main biological processes and signaling pathways of immune responses. We further identified and analyzed hub genes in the protein-protein interaction (PPI) network and evaluated their prognostic values. RESULTS: Immune score significantly correlated with immune cell infiltration and overall survival of PCa patients. The genes CXCR4 and GPR183, identified as hub genes in the PPI network, correlated with immune cell infiltration and prognosis of PCa patients. CONCLUSION: CXCR4 and GPR183 participate in immune cell infiltration and function in PCa patients. The immune score, as well as the expression of CXCR4 and GPR183 in prostate cancer tissues, could be potential indexes for the prognosis of prostate cancer. Frontiers Media S.A. 2020-10-30 /pmc/articles/PMC7662134/ /pubmed/33194726 http://dx.doi.org/10.3389/fonc.2020.584055 Text en Copyright © 2020 Sun, Shi, Yuan, Xia, Xiang, Quan, Shi and Jiang http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Sun, Wenguo Shi, Hailin Yuan, Zhen Xia, Li Xiang, Xuebao Quan, Xiangfeng Shi, Wenjie Jiang, Leiming Prognostic Value of Genes and Immune Infiltration in Prostate Tumor Microenvironment |
title | Prognostic Value of Genes and Immune Infiltration in Prostate Tumor Microenvironment |
title_full | Prognostic Value of Genes and Immune Infiltration in Prostate Tumor Microenvironment |
title_fullStr | Prognostic Value of Genes and Immune Infiltration in Prostate Tumor Microenvironment |
title_full_unstemmed | Prognostic Value of Genes and Immune Infiltration in Prostate Tumor Microenvironment |
title_short | Prognostic Value of Genes and Immune Infiltration in Prostate Tumor Microenvironment |
title_sort | prognostic value of genes and immune infiltration in prostate tumor microenvironment |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7662134/ https://www.ncbi.nlm.nih.gov/pubmed/33194726 http://dx.doi.org/10.3389/fonc.2020.584055 |
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